Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03433 ATGGACAAAGTTATACAAGAGTTTGAGTCATTGACAAAGGATGCGGAAAGGGTTCAGAGGGAAACTCTCAAGAGGATTTTGGAGGATAACGCTTCAGCGGAGTATTTGCAGAGTTTGGGTCTCAATGGAAGAACTGATCCCCACAGTTTCAAGTCTTGTGTTCCTCTGGTTACCCACAAAGAATTGGAACCTTATATCTACAGAATTATTGATGGCGATGCCTCTCCTATTCTCACAGGAAAAACTATCACAACCATGTCCTTAAGTTCTGGTACTACACAGGGGAAGCCAAAATATGTACCCTGGAACGATGAATTGTTTGAAACCACAATGCAGATATACCAGACCTCTTTTGCTTTTAGGAACAGAGAGTTTCCTATTAAAAATGCGAAGGCTTTGAGCTTTATATACGGTAGCAAACAGTTAAAAACAAAGGGGGGTCTGGCGGCCAGGACTGCTACAAGCAATGTGTTCCGTAGTGCTGGTTACAAATGTGCAATGAGGGCACTCCAATCGCAATGCTGTAGCCCAGATGAAGTGATATTTGGTCCTGATTTTTTCCAATCATTGTACTGCCATCTGTTATGTGGTTTGATTTTCCGAGAGGAAGTTCAGTTTGTGTCTTCTACATTTGCACATAGCATTGTGCATGCTTTTAGAACCTTTGAACAAGTGTGGGAAGAGCTGTGTAATGATATTAGAGAAGGGGTTCTCACCAGCAATGTCACCGTTCCTTCCATTCGAATGGCTATGTCTAAACTGCTCAAACCAAACCCGGAATTAGCCAACGTGATCCACAAGAAGTGCATGGGATTGAGCAACTGGTACGGGTTGATACCAGAGCTTTTTCCCAATGCAAAGTATATTTATGGCATCATGACTGGGTCAATGGAGCCTTATTTGAAAAAGTTGAGCCACTATGCAGGGGAGCTGCCTTTGTTGACTGCTGACTATGGATCTTCTGAGGGATGGATAGCAGCAAATGTGAACCCACGACTTCCCCCTGAGAAGGCCACTTATGCTGTGCTTCCTCACATTGGTTACTTTGAATTTATTCCTCTCTCACAGCTTGAGAGCATCAATGGTGAACCTGATTTCCTCTCTAGTGATCCTCAGCCTGTGGGCCTCACTGAAGTCAAGGTTGGTGAAGAGTATGAAATTGTTATGACCAATCCAGCAGGCTTATACCGGTATAGATTGGGGGATGTGGTGAAGGTTATGGGATTCCACAATTCAACTCCAGAACTCAAGTTTATTCGAAGGAGCAGTCTTCTGCTGAATATTAACATCGACAAGAACACTGAGAAGGATTTACAGTTAGCTGTAGAAGCAGCAGCAAAGTTGTTAGCAGAGGAAAGATTGGAAGTCGTCGACTTCAGTAGCCATGTTGATTTATCCAAAGAGCCAGGGCACTATGTTATCTTCTGGGAAACCAGCGGAGAAGCAAGTGAAGAACTACTCCATGAATGCTCTAACTGTTTAGACAAGTCTTTTGTTGATGCAGGATACACCAGTTCTCGCAAAGTGAACTGCATTGGTGCTCTGGAGCTAAGAGTTGTTAAGAGAGGAACATTCCAGAAGATTCTAGATCACTACCTAGGACTAGGAACCGCTGTTAGTCAGTATAAGACTCCAAGATGTGTGGGTCCTACTAACACCAAAGTGTTGCAAATATTGAGTGAAAATGTTGTGAAAAGCTTTATCAGCACTGCTTTCAATTGAATAAATGTTTACTATGGTGTATGTTGAATTAGAGAGAAAGATATAAATTAGGTTGTTTGGTAAAAGGTGGTTTACAATTGGAAGGTTTAAAATTATTGAGTTCA 1826 0.4222 MDKVIQEFESLTKDAERVQRETLKRILEDNASAEYLQSLGLNGRTDPHSFKSCVPLVTHKELEPYIYRIIDGDASPILTGKTITTMSLSSGTTQGKPKYVPWNDELFETTMQIYQTSFAFRNREFPIKNAKALSFIYGSKQLKTKGGLAARTATSNVFRSAGYKCAMRALQSQCCSPDEVIFGPDFFQSLYCHLLCGLIFREEVQFVSSTFAHSIVHAFRTFEQVWEELCNDIREGVLTSNVTVPSIRMAMSKLLKPNPELANVIHKKCMGLSNWYGLIPELFPNAKYIYGIMTGSMEPYLKKLSHYAGELPLLTADYGSSEGWIAANVNPRLPPEKATYAVLPHIGYFEFIPLSQLESINGEPDFLSSDPQPVGLTEVKVGEEYEIVMTNPAGLYRYRLGDVVKVMGFHNSTPELKFIRRSSLLLNINIDKNTEKDLQLAVEAAAKLLAEERLEVVDFSSHVDLSKEPGHYVIFWETSGEASEELLHECSNCLDKSFVDAGYTSSRKVNCIGALELRVVKRGTFQKILDHYLGLGTAVSQYKTPRCVGPTNTKVLQILSENVVKSFISTAFN 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03433 573 Pfam GH3 auxin-responsive promoter 7 548 IPR004993 -
Pste5g03433 573 Coils Coil 1 21 - -
Pste5g03433 573 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 2 572 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03433 Pste-Chr5 27647926 27651211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03433 5 570 EF-hand Containing Proteins AT1G23160 38.554 1.38e-134 402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g03433 5 27647926 27651211 Pste6g01850 6 8503126 8506681 PCT