Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01767 ATGGTAACCCTCTTCCTCTGCATAACCACAGCCTCCACTGAACCAAAGAACTCCCAAACCGAAACCCTCCTCCTCCGCAACCTTCCGAACCAACCCAGACTCTCATGGCCGGAATGGACCGTAACAGAACCCGACCCGGAATCCAGCACGGCCGTTCTCCTCGAGCACGTGGACGCACTGAGGCTGGACAAAAGCCCTTCCGAACTCTTCGAAGGTAGACTAAAGCGCGACGCTGCAAGGTGTCGGGGCTCGCACAGGGCAGCGGCGAGTACTTCACGCGGCTTGGCGTGGGAACTCCCCCGAGGTACCTTTACATGGTCCTCGACACGGGAAGCGACGTCGTTTGGCTCCAATGCAAACCCTGCGCCAAATGCTACTCCCAAACCGACCAAATCTTCGACCCCACACAATCCAAAACCTTCGCCGGAATCCCATGCACCTCCCCTCTGCCGCCGCCTCGACTCCCCCGGATGCAGCCGCAAACGTAACATCTGTCAGTACCAAGTTTCCTACGGCGATGGCTCCTTCACTTTCGGAGATTTCTCAACCGAAACCCTCACCTTTCGACGCTCCGAGGTCCCGCGCGTCGCCCTCGGCTGCGGCCATGACAACGAGGGACTCTTCGTCGGCGCCGCTGGTTTGTTAGGCCTCGGTCGCGGCGGCTTGTCGTTTCCCGTCCAGGCCGGTGCCCGGTTTAACAACAAATTCTCTTACTGTTTAACGGATCGAACCGCTTCGGCTAAACCGTCTTCCCTTGTTTTTGGTGACTCGGCCGTTTCTCGAACCGCCCGATTCACTCCTTTGATTAAAAACCCTAAGCTCGACACCTTTTATTATGTTGAGCTTCTTGGGGTTAGTGTTGGTGGCGCGCCGGTTCGAGGAATCTCAGCTTCGCTTTTTCGGCTCGACTCGACCGGGAATGGCGGGGTGATTATTGACTCGGGGACTTCCGTGACGCGCCTCACGCGCCCCGCTTATGTTGCCCTCAGAGACGCTTTTCGGGTCGGGGCGTCACACTTGAAGCGTGCACCAGAATTTTCTCTTTTCGACACGTGTTTTGACCTTTCGGGTCTGTCGGAGGTTAAGGTTCCGACCGTGGTGTTGCATTTCCGCGGTGCTGATGTGTCGTTGCCGGCTGCTAATTATCTCATTCCGGTGGATAACAACGGTAGCTTTTGTTTTGCATTCGCCGGAACGATGAGTGGGTTGTCCATTATCGGAAACATACAACAGCAAGGATTTCGGGTTGTGTTTGATCTGGCGGGTTCTCGGGTCGGGTTTTCCCCAAGAGGCTGCGCGTGA 1302 0.5653 MVTLFLCITTASTEPKNSQTETLLLRNLPNQPRLSWPEWTVTEPDPESSTAVLLEHVDALRLDKSPSELFEGRLKRDAARCRGSHRAAASTSRGLAWELPRGTFTWSSTREATSFGSNANPAPNATPKPTKSSTPHNPKPSPESHAPPLCRRLDSPGCSRKRNICQYQVSYGDGSFTFGDFSTETLTFRRSEVPRVALGCGHDNEGLFVGAAGLLGLGRGGLSFPVQAGARFNNKFSYCLTDRTASAKPSSLVFGDSAVSRTARFTPLIKNPKLDTFYYVELLGVSVGGAPVRGISASLFRLDSTGNGGVIIDSGTSVTRLTRPAYVALRDAFRVGASHLKRAPEFSLFDTCFDLSGLSEVKVPTVVLHFRGADVSLPAANYLIPVDNNGSFCFAFAGTMSGLSIIGNIQQQGFRVVFDLAGSRVGFSPRGCA 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01767 433 MobiDBLite consensus disorder prediction 111 132 - -
Pste6g01767 433 ProSiteProfiles Peptidase family A1 domain profile. 95 428 IPR033121 -
Pste6g01767 433 Pfam Xylanase inhibitor C-terminal 278 428 IPR032799 -
Pste6g01767 433 Gene3D Acid Proteases 254 433 IPR021109 -
Pste6g01767 433 PANTHER ASPARTYL PROTEASES 128 426 IPR001461 GO:0004190|GO:0006508
Pste6g01767 433 MobiDBLite consensus disorder prediction 111 152 - -
Pste6g01767 433 Gene3D Acid Proteases 101 253 IPR021109 -
Pste6g01767 433 Pfam Xylanase inhibitor N-terminal 104 256 IPR032861 -
Pste6g01767 433 SUPERFAMILY Acid proteases 121 432 IPR021109 -
Pste6g01767 433 FunFam Aspartyl protease family protein 2 256 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01767 Pste-Chr6 8043982 8045362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01767 124 432 Miscellaneous Gene Families AT1G77480 27.566 5.46e-18 84.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01767 6 8043982 8045362 Pste6g01767 6 8043982 8045362 ECH
Pste5g03464 5 28049102 28050588 Pste6g01767 6 8043982 8045362 PCT