Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g03464 ATGGAAATGGAAATGGAAATGGAAATGGAAGGGAAGAATAAAAGAAAGAATGGACTTATCTTGGTATGCTTATACCTGGGCTTGTGTGTGTGGTGTGTGGGTGGTGGCGTCACTGAACTGGAAACCCAAACCTTAACCGTGGGTCTGCACTCTCTGCCGGGACTGGAAGGGAAAACTCTGTCATGGCCCAAATGGGAAGGTTACTGGCTTGAGCATGCGAATGAGCAAGAGCAAGAGCAAGAGCAAGAGCAAGAGCTTGAGGTTGAACTGGACCTCCACCACATAGACGCACTGTTGTCGTCCTCAAACGAAACAGCGGAGCAGCGTTTCCACAAGAGGCTCGAGCGGGACGCGAAGAGAGTGGAGGCTGTAGAAGCGCTGTCGCGGGGAGTACTTCACGCGCATAGGGGTGGGCACACCGGCCAAATACGTCTACATGGTATTGGACACCGGAAGCGACGTCGTTTGGCTCCAATGTGCCCCCTGTCGCAAATGCTACACCCAAACCGACCCCTATTCGACCCAACCAAATCCCGATCCTACGCCGGAATCCCCTGCGCTGCCCCTCTCTGCCGCCGCTTGGACTCCCCCGCCTGCAACACTAACAAGCTTTGCCAGTACCAGGTTTCCTACGGCGACGGCTCCTTCACTCTCGGCGATTTCTCCACCGAGACCCTCACCTTTCGCAGAACTAGAGTGTCCCGCGTCGCCCTCGGCTGTGGTCACCACAATGAAGGACTCTTCGTTGGCGCCGCTGGCCTTTTGGGCCTCGGCCGCGGCACCTTGTCATTTCCTCTCCAGACCGGACGCCGCTTCAATCACAAATTCTCTTACTGCCTCGTCGACCGCTCCGCCTCCTCCAAACCCTCCTCCGTTCTCTTCGGCGATTCCGCGCTTTCCCGAACCGCGCGCTTCACTCCTCTGCTCAAAAACCCTAAGCTCGACACCTTCTATTACGTCGAGCTCCTCTCCATCAGTGTCGGCGGCGCCCCGGTTCGCGGCCTCTCCGCCTCTCTCTTCCGCCTCGACGCCGCGGGTAACGGCGGCGTCATCATCGACTCTGGTACTTCCGTCACCCGACTCACTCGACCCGCCTACACTGCCCTCCGCGACACATTCCGCCTGGGGGCCTCGCATCTGAAACGCGCGCCGGAGTTCTCGCTCTTCGACACGTGCTTCGACCTATCCGGTCTGACGTCCGTGAAAGTGCCAACAGTGGTGCTCCATTTCCGCGGTGCTGACGTGTCTCTTCCGGCGTCGAACTACTTGATTCCGGTGGACAACACTGGTACCTTCTGCTTCGCGTTTGCGGGAACCATGAGCGGTTTGTCCATAGTTGGCAACATCCAGCAGCAAGGGTTCCGGGTCTCGTACGACCTGGCGGGTTCTCGGATCGGGTTTGCCCTGAGAGGTTGCGTTTGA 1422 0.5816 MEMEMEMEMEGKNKRKNGLILVCLYLGLCVWCVGGGVTELETQTLTVGLHSLPGLEGKTLSWPKWEGYWLEHANEQEQEQEQEQELEVELDLHHIDALLSSSNETAEQRFHKRLERDAKRVEAVEALSRGVLHAHRGGHTGQIRLHGIGHRKRRRLAPMCPLSQMLHPNRPLFDPTKSRSYAGIPCAAPLCRRLDSPACNTNKLCQYQVSYGDGSFTLGDFSTETLTFRRTRVSRVALGCGHHNEGLFVGAAGLLGLGRGTLSFPLQTGRRFNHKFSYCLVDRSASSKPSSVLFGDSALSRTARFTPLLKNPKLDTFYYVELLSISVGGAPVRGLSASLFRLDAAGNGGVIIDSGTSVTRLTRPAYTALRDTFRLGASHLKRAPEFSLFDTCFDLSGLTSVKVPTVVLHFRGADVSLPASNYLIPVDNTGTFCFAFAGTMSGLSIVGNIQQQGFRVSYDLAGSRIGFALRGCV 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g03464 473 Pfam Xylanase inhibitor N-terminal 161 296 IPR032861 -
Pste5g03464 473 PANTHER ASPARTYL PROTEASES 79 466 IPR001461 GO:0004190|GO:0006508
Pste5g03464 473 ProSiteProfiles Peptidase family A1 domain profile. 72 468 IPR033121 -
Pste5g03464 473 Gene3D Acid Proteases 295 472 IPR021109 -
Pste5g03464 473 Gene3D Acid Proteases 158 294 IPR021109 -
Pste5g03464 473 FunFam Aspartyl protease family protein 2 296 472 - -
Pste5g03464 473 SUPERFAMILY Acid proteases 164 472 IPR021109 -
Pste5g03464 473 Pfam Xylanase inhibitor C-terminal 318 468 IPR032799 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g03464 Pste-Chr5 28049102 28050588 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g03464 184 472 Miscellaneous Gene Families AT1G77480 26.398 1.54e-13 70.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g03464 5 28049102 28050588 Pste6g01767 6 8043982 8045362 PCT