Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01363 atggaacatcacaaaccattgttacccacttcctcagaatcagagggttgtccttctccaaatccacgcactcgcaaggacaagggccttcttgtagttcttggtggttttcttttgctctcttcccttgttgcctatggggggtacagagcctcccacgtgccgcatgctcacgtggcatcgccaacatccaaccatgaccaacatagttccaaatcggtgccttcaacaaaatggcacccggtttctcgaggtctttcttctggggtgtcggaaaagtcatccacggtctcatttgcaacttcacaaccttttccttgggacaatagcatgttgtcctggcagagaactgcttttcatttccaaccagacaaaaactggatgaacggtcctttgtactacaagggatggtatcactttttctaccaatacaatccgaacggtgcagtttggggtgacatagtatggggacacgcggtgtcaagggacatgatccattggcttcaccttccattggcaatggtggctgatcaatggtatgataagaacggtgtgtggacaggctctgccaccatcttagccgatggtcaaatcatgatgctatacacaggttcaaccaacgagtcagtgcaagttcaaaaccttgcatacccggctgacccctctgaccctctccttgtggattggatcaaatatcctgggaacccggttttggtgccaccaccaggaattggagtcaaggactttcgtgaccctacaactgcatggctcacccctgaaggcaagtggcgcatcaccatagggtccaagcttaacaaaactggcattgctttagtttatgacactgtggacttcaagacctatgagcttaaggagggcctgcttcgtgctgtccctaccactggtatgtgggagtgtgtggacttcttccctgtctccaaggaaaatgtaaatggtttggatacctctactgatggggctggggttaagcatgttatgaaggtcagcttggatgatgatagacatgattactattcaattgggacttacgatgagaacaatgttttgttcacaccggatgatgctaaaaatgatgttggtgttggattgaggtatgactatggaatattctatgcatccaagacattttatgatcagaataaggcgaggagaattttgtggggttggattggagagtctgacagtgaatatgcagatgtggccaaaggttgggcttcagttcagagtattccaagaactgtgaagcttgatacgaagactggcagcaacttacttcagtggcctgttgctgaggtggagagtttgagattgagaagcgatgaattcaaaaatttgaaggcaaaaccagggtccgtggtgtcactagatattgaaacagccacacagttagacattgttgctgagtttgagatagacaaggaatccctagagaaaacagttgagtccaacgaggagtacacgtgcagcaccagtggaggagctgcacaacgtggtgccttaggaccttttggtctttcggttttggcagatgacggcctttctgagtctaatcctgtgtatttttatgtcactaaaggaagcaacggaaatcttaagacttccttttgctctgatcaatcaaggtcttctgaggcaaatgatgttcgtaagcaaatccttgggagcgttgttccagtacttaaaggcgaaaagttttccttgcggatactggtggaccattctattgttgaaagctttgctcaaggtggaaggacatgtgtgacatctcgggtttatccaacaaaggcaatctatggagctgctagattgttcatgttcaacaatgctactgaggccactgtgacagcctcactcaaaatttggcaaatgaattctgcatttatacacccattccaccctgatcagaagaattag 1935 0.0 MEHHKPLLPTSSESEGCPSPNPRTRKDKGLLVVLGGFLLLSSLVAYGGYRASHVPHAHVASPTSNHDQHSSKSVPSTKWHPVSRGLSSGVSEKSSTVSFATSQPFPWDNSMLSWQRTAFHFQPDKNWMNGPLYYKGWYHFFYQYNPNGAVWGDIVWGHAVSRDMIHWLHLPLAMVADQWYDKNGVWTGSATILADGQIMMLYTGSTNESVQVQNLAYPADPSDPLLVDWIKYPGNPVLVPPPGIGVKDFRDPTTAWLTPEGKWRITIGSKLNKTGIALVYDTVDFKTYELKEGLLRAVPTTGMWECVDFFPVSKENVNGLDTSTDGAGVKHVMKVSLDDDRHDYYSIGTYDENNVLFTPDDAKNDVGVGLRYDYGIFYASKTFYDQNKARRILWGWIGESDSEYADVAKGWASVQSIPRTVKLDTKTGSNLLQWPVAEVESLRLRSDEFKNLKAKPGSVVSLDIETATQLDIVAEFEIDKESLEKTVESNEEYTCSTSGGAAQRGALGPFGLSVLADDGLSESNPVYFYVTKGSNGNLKTSFCSDQSRSSEANDVRKQILGSVVPVLKGEKFSLRILVDHSIVESFAQGGRTCVTSRVYPTKAIYGAARLFMFNNATEATVTASLKIWQMNSAFIHPFHPDQKN 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01363 644 Gene3D - 447 630 - -
Pste6g01363 644 MobiDBLite consensus disorder prediction 58 87 - -
Pste6g01363 644 SUPERFAMILY Concanavalin A-like lectins/glucanases 435 634 IPR013320 -
Pste6g01363 644 Gene3D Glycosyl hydrolase domain; family 43 124 446 IPR023296 -
Pste6g01363 644 SMART glyco_32 120 590 IPR001362 GO:0004553|GO:0005975
Pste6g01363 644 Pfam Beta-fructofuranosidase, N-terminal domain 4 112 IPR021792 GO:0004564
Pste6g01363 644 SUPERFAMILY Arabinanase/levansucrase/invertase 113 436 IPR023296 -
Pste6g01363 644 CDD GH32_Fruct1-like 126 423 - -
Pste6g01363 644 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 109 633 - -
Pste6g01363 644 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 124 447 - -
Pste6g01363 644 MobiDBLite consensus disorder prediction 1 26 - -
Pste6g01363 644 Pfam Glycosyl hydrolases family 32 N-terminal domain 120 435 IPR013148 -
Pste6g01363 644 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 447 630 - -
Pste6g01363 644 Pfam Glycosyl hydrolases family 32 C terminal 438 629 IPR013189 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01363 Pste-Chr6 5878152 5882434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01363 1 638 Glycoside Hydrolase AT1G12240 63.378 0.0 834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01363 6 5878152 5882434 Pste6g01363 6 5878152 5882434 ECH
Pste1g00802 1 2492319 2497653 Pste6g01363 6 5878152 5882434 PCT