Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00802 ATGGAAAGCCCCAGGAATGATTCAGAACTTCCCTGTTCATATACCCGTGTACCCGATGGACCCCAGTCTTCCGCAGAACCTCGAAGACAGGTGGTGAAGGAAGTGGTTGTGATATTTTGTGGGTTGCTAGTGCTTGTGTCCTTGGTAGCCTTCAATGGCTACAGGGCGCATTCAAATGGACATGGGAATCATGCGCCATTGCCGACGTTGTTAACACCCAATCCCAGTGGATTAAAATCGAGCCCCGACACAGTACCATGGTCGATGGTTTCACGTGGAGTGTCTGAAGGGGTATCGCAGAAGTCCAGCTGGCTATTGAGCAGCAACAATGGAAACGGAGAATCGTATCCATGGAACAATAGCATGCTGTCATGGCAGAGAACAGCTTACCATTTCCAGCCTGAGAAGAATTGGATGAACGGTCCAATGTACTACAAAGGGTGGTATCACTTCTTCTACCAGTACAATCCGAAGGGTGCAGTTTGGGGTGACATAGTTTGGGGACACGCTGTATCAAAGGACATGATCCACTGGCTTCACCTTCCACTAGCAATGGTGGCTGACCAGTGGTATGACAAAAACGGTGTGTGGACTGGCTCTGCAACCATCTTACCTGATGGTCAAGTCGTCATGCTATACACTGGTTCCACCAACGAGTCAGTGCAGGTACAAAACCTTGCGTACCCAGCTGACCCCTCTGATCCCCTCCTTGTTGATTGGATCAAATACCCTGCAAACCCTGTTTTATTCCCACCACCTGGCATTGGTGCCAAGGATTTTCGTGACCCCACCACTGCTTGGCTCACCTCTGAAGGAAAGTGGCGCATCACTATTGGTTCTAAGCTCAACAAAACTGGCATTGCCTTGGTTTATGATACCTATGACTTTAAGACATTTGAGCGTGTGGAGGGAGTTCTTCATGCTGTGCCTAGCACTGGCATGTGGGAGTGTGTTGACTTCTTCCCCGTATCCAACAGGGGTGAAAATGGCTTCGATACTTCAATTAAGGGGAAGAATGTGAAGCATGTAGTAAAGGTTAGCTTGGATGATGATAGACATGATTACTATGCACTAGGTACGTATGATGAGAAGAATGTTAAATTCACACCAGATGACTTCAAGAACGATGTTGGTATTGGACTCAGATATGACTATGGTATATTTTATGCATCCAAGACATTTTATGATCAGAGTAAGGGCAGGAGAGTCTTGTGGGGTTGGATTGGAGAGTCTGATAGCGAATACGCTGATGTGGCCAAAGGTTGGGCATCAGTTCAGGGTATTCCAAGAACAGTGGCACTTGATAGGAAAACTGGTAGGAATTTACTTCAATGGCCCGTAGCAGAGGTGGAAAGTTTGAGATTGAGAAGCGATGAGTTTCAAAATTTGACCGTGAATCCAGGGTCAGTGGTGCCACTAGAAATCGGAACAGCTGCACAGTTGGACATTGAAGCCGAGTTTGAGATAGATAAGGAAGCCTTGGAGAAGACAAGCCAGTCCAATATGGAGTACGAGTGTAGCAGCAGTGGTGGAGCAACTGAACGTGGTGCCTTTGGACCTTTTGGCCTTCTAGTTTTGGCTGATGATCATCTTTCTGAATACACTTCCGCATACTTTTATGTCGTCAAAGGAAGTGACGGACAACTTAAAACTTCCTTTTGCTCTGATCAATCAAGGTCTTCTCTAGCAACGGATGTTAGTAAAAAAAATTTTGGAAGCTTTGTTCCAGTACTGAAGGATGAAAAGTTGTCAGTTAGGATATTGGTGGACCATTCTATAGTGGAAAGCTTTGCTCAAGGTGGAAGGACGTGCGTGACATCTCGGGTTTACCCAACGAGGGCAATTTATGGAGCTGCTCGATTATTCTTGTTCAATAATGCTACTGAGGCCATTGTGAATGCTTCACTTAAGGTTTGGCAAATGAATTCTGCATTCATACACCCATTCCAACCTGATCAAAGAAATTGA 1968 0.4588 MESPRNDSELPCSYTRVPDGPQSSAEPRRQVVKEVVVIFCGLLVLVSLVAFNGYRAHSNGHGNHAPLPTLLTPNPSGLKSSPDTVPWSMVSRGVSEGVSQKSSWLLSSNNGNGESYPWNNSMLSWQRTAYHFQPEKNWMNGPMYYKGWYHFFYQYNPKGAVWGDIVWGHAVSKDMIHWLHLPLAMVADQWYDKNGVWTGSATILPDGQVVMLYTGSTNESVQVQNLAYPADPSDPLLVDWIKYPANPVLFPPPGIGAKDFRDPTTAWLTSEGKWRITIGSKLNKTGIALVYDTYDFKTFERVEGVLHAVPSTGMWECVDFFPVSNRGENGFDTSIKGKNVKHVVKVSLDDDRHDYYALGTYDEKNVKFTPDDFKNDVGIGLRYDYGIFYASKTFYDQSKGRRVLWGWIGESDSEYADVAKGWASVQGIPRTVALDRKTGRNLLQWPVAEVESLRLRSDEFQNLTVNPGSVVPLEIGTAAQLDIEAEFEIDKEALEKTSQSNMEYECSSSGGATERGAFGPFGLLVLADDHLSEYTSAYFYVVKGSDGQLKTSFCSDQSRSSLATDVSKKNFGSFVPVLKDEKLSVRILVDHSIVESFAQGGRTCVTSRVYPTRAIYGAARLFLFNNATEAIVNASLKVWQMNSAFIHPFQPDQRN 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00802 655 SUPERFAMILY Concanavalin A-like lectins/glucanases 446 645 IPR013320 -
Pste1g00802 655 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 120 644 - -
Pste1g00802 655 CDD GH32_Fruct1-like 137 434 - -
Pste1g00802 655 MobiDBLite consensus disorder prediction 1 27 - -
Pste1g00802 655 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 135 458 - -
Pste1g00802 655 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 458 641 - -
Pste1g00802 655 Gene3D - 458 641 - -
Pste1g00802 655 Pfam Beta-fructofuranosidase, N-terminal domain 13 123 IPR021792 GO:0004564
Pste1g00802 655 SMART glyco_32 131 601 IPR001362 GO:0004553|GO:0005975
Pste1g00802 655 Gene3D Glycosyl hydrolase domain; family 43 135 457 IPR023296 -
Pste1g00802 655 Pfam Glycosyl hydrolases family 32 N-terminal domain 131 446 IPR013148 -
Pste1g00802 655 SUPERFAMILY Arabinanase/levansucrase/invertase 124 447 IPR023296 -
Pste1g00802 655 Pfam Glycosyl hydrolases family 32 C terminal 449 640 IPR013189 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00802 Pste-Chr1 2492319 2497653 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00802 3 649 Glycoside Hydrolase AT1G12240 62.801 0.0 833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00802 1 2492319 2497653 Pste1g00802 1 2492319 2497653 ECH
Pste1g00802 1 2492319 2497653 Pste6g01363 6 5878152 5882434 PCT