Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01303 GACTCAACCACTAGTCATAAGAGCGATGCAATTATGCAGACCAATAAGAATGAATATAAGAAACCGTGGAACATGCATTGCATTCTCCTTAGTGGTTGGTGCCAGCTTAAACAAAATCAAATTTTCTCAGACAAACAATAAATGAGAATTCAGAAGCCAAATACCCAACTCCAATAACACACATTTGCAGACACAGCAACAAAGTTTTAGCCTTTCAAGAAGGGATCAACTCAAAGGAAAGGACTCAAATTTGCTCACGCAACCTTTGGTTCCTTTCCCAGCCAACACCATGGTGGCTGATTCTAAATCTGACCTCTCCTTCGGCAAAACCTTTGCCAGCAGTGCTTTCTCTGCATGTTTCGCTGAGGTTTGTACTATTCCATTGGACACTGCCAAAGTTAGGCTTCAGCTTCAAAAGCAAGCTGTAGTTGGTGATGTAGTCTCCTTACCTAAATATAAGGGTCTGCTGGGAACAGTTGGAACCATTGCCAGGGAAGAAGGTCTTTCAGCACTATGGAAGGGAATTGTGCCAGGGTTACATCGTCAATGTGTGTATGGAGGTTTAAGAATTGGGTTATATGAGCCTGTTAAGAGTTTATATGTGGGGAAGGAGTATGTTGGAGATGTTCCACTGTCAAAGAAAATTCTTGCTGCATTTACAACTGGTGCTGTGGCTATTGCAGTGGCAAATCCGACTGATCTTGTCAAAGTTAGACTTCAAGCAGAAGGAAAATTACCTCCTGGTGTTCCAAGACGCTACTCTGGATCTTTAAATGCTTATTCAACGATTGTGAGACAGGAAGGAATTGGGGCTCTTTGGACAGGGCTTGGCCCCAATATAGCAAGAAATGGTATCATCAATGCTGCTGAATTAGCCAGCTATGATCAAGTGAAACAGACTATTTTGAAACTTCCAGGATTCACCGACAATGTTGTAACTCATCTCCTTGCTGGTCTTGGGGCAGGGTTTTTTGCTGTTTGTATTGGCTCCCCTGTCGATGTGGTTAAGTCAAGAATGATGGGAGATTCTAGTTACAAGAACACTCTTGATTGTTTTGTCAAAACATTAAAGAATGATGGACTTTTAGCTTTTTACAAAGGATTCCTCCCAAATTTTGGTCGGCTGGGATCTTGGAATGTGATCATGTTTCTAACCTTAGAACAGACTAAAAAGTTCGTCAAAAGTTTAGAGTCGTCCTGAGCTCAGACCATGACCATGAGGATTTTGTATAGGGACTGGTTACAGCTGCAAATGCAGCGGAAATTGCAGAAAATAAATGTCCCTATCTCTTCATTCTGCTAACCAGGATGCAGTAAAACATTCTTTTAGGGAATCAAACAAGAATGTTATTCATATGTACTTAGCTTTTAGCAATTGCCATATGTTGTGTGGTGTTGCATGCAGTTTTGCATGTAATTCTCTTTAAATTTTATTTTGAACCAAGCTTGGTCATGACATGAGATTTTTTTCAAATTTGGTGTGGTTCAAGCCTCAACCAATGTTTCATTCATTCATAAATTTGACCACAACATAGCCCTTGATCACCTATTGTCTTATAGTGTGTTGACTGGTTTGCAAGCCACAACATTATAGCAACTCTAATCAGGGTGCATATGTTGGCTTTTAATGTTAAGC 1636 0.404 MVADSKSDLSFGKTFASSAFSACFAEVCTIPLDTAKVRLQLQKQAVVGDVVSLPKYKGLLGTVGTIAREEGLSALWKGIVPGLHRQCVYGGLRIGLYEPVKSLYVGKEYVGDVPLSKKILAAFTTGAVAIAVANPTDLVKVRLQAEGKLPPGVPRRYSGSLNAYSTIVRQEGIGALWTGLGPNIARNGIINAAELASYDQVKQTILKLPGFTDNVVTHLLAGLGAGFFAVCIGSPVDVVKSRMMGDSSYKNTLDCFVKTLKNDGLLAFYKGFLPNFGRLGSWNVIMFLTLEQTKKFVKSLESS 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01303 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 296 IPR018108 -
Pste6g01303 303 PRINTS Mitochondrial brown fat uncoupling protein signature 44 63 IPR002030 GO:0006839|GO:0031966
Pste6g01303 303 PRINTS Mitochondrial brown fat uncoupling protein signature 16 28 IPR002030 GO:0006839|GO:0031966
Pste6g01303 303 PRINTS Mitochondrial brown fat uncoupling protein signature 167 184 IPR002030 GO:0006839|GO:0031966
Pste6g01303 303 PRINTS Mitochondrial brown fat uncoupling protein signature 285 303 IPR002030 GO:0006839|GO:0031966
Pste6g01303 303 PRINTS Mitochondrial brown fat uncoupling protein signature 97 109 IPR002030 GO:0006839|GO:0031966
Pste6g01303 303 PRINTS Mitochondrial brown fat uncoupling protein signature 210 228 IPR002030 GO:0006839|GO:0031966
Pste6g01303 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 117 204 IPR018108 -
Pste6g01303 303 PANTHER MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED 13 295 - -
Pste6g01303 303 ProSiteProfiles Solute carrier (Solcar) repeat profile. 9 103 IPR018108 -
Pste6g01303 303 Pfam Mitochondrial carrier protein 112 207 IPR018108 -
Pste6g01303 303 Pfam Mitochondrial carrier protein 214 298 IPR018108 -
Pste6g01303 303 Pfam Mitochondrial carrier protein 8 106 IPR018108 -
Pste6g01303 303 FunFam Mitochondrial uncoupling protein 1 12 301 - -
Pste6g01303 303 Gene3D Mitochondrial carrier domain 4 302 IPR023395 -
Pste6g01303 303 SUPERFAMILY Mitochondrial carrier 8 292 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01303 Pste-Chr6 5619266 5624826 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01303 1 303 Miscellaneous Gene Families AT3G54110 82.237 0.0 520
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02162 5 14207059 14211434 Pste6g01303 6 5619266 5624826 PCT