Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02162 GAAGCCATTATTCTGCTTCTCTTTCTACGCTTTCTGTTTGCTTTTCCTTCCTCCAATCTCTCTCTTCATTTGTTGTAAACATTTATTCGAAGCAATGGTGGGGGGTGGCAATTCCAAATCCGACATCTCCTTTGCGGGCACTTTCGCCAGCAGTGCTTTCGCTGCATGTTTCGCCGAGGTGTGTACTATTCCTCTGGACACTGCCAAAGTTAGGCTTCAGCTTCAAAAGCAGGCTGTACTTGGTGATGTGATTGCCTTACCTAAATATAGGGGTTTGCTGGGAACAGTTGGAACCATTGCCAGGGAAGAAGGTCTTTCAGCACTCTGGAAGGGGATTGTGCCTGGGCTACATCGTCAATGTTTGAATGGAGGTTTAAGAATTGCATTATATGAGCCTGTTAAGAATTTCTATGTCGGGGCTGACCATGTTGTAGATGTTCCATTGTCTAAGAAAATTCTAGCTGGATTTACGACTGGTGCTATGGCAATTTCAGTGGCAAATCCAACTGATCTTGTGAAAGTTAGACTTCAAGCAGAAGGAAAATTACTTCCCGGTGTGCCCAGACGCTACTCTGGATCATTAAATGCTTATTCAACAATTGTGAGACAGGAAGGAGTTGCAGCACTTTGGACTGGGATTGGTCCCAACATAGCAAGAAATGCTATCATTAATGCTGCTGAACTAGCCAGCTATGATCAAGTGAAACAGACTATTTTGAAAATCCCTGGATTCACGGACAATGTTGTAACTCACCTTCTTGCTGGTTTAGGAGCAGGATTTTTTGCAGTCTGTGTTGGTTCCCCAGTTGATGTGGTTAAGTCAAGAATGATGGGAGATTCGGGTTACAAAAGCACCCTTGATTGTTTCATCAAGACATTAAGAAATGATGGACCTTTTGCCTTTTATAAGGGTTTCATACCAAATTTTGGACGGCTAGGATCTTGGAATGTGATCATGTTTTTAACTCTAGAACAGGCTAAAAAGTTCGTCAAGAGTTTAGAATCAGCTTGACCTCAAACAATTATCAGTAGAATTTTTTGAGGACACTGTCCCCAAATGCAATGGAAAGTTTCAAGAAAATACACTTTTTTTAAGAGAAGAAAAACTTCTCTTCATTTATTAATTGGAATGTACCAAAACATTTTTTTGTTGAGATCAAAATGAAGTATTAATAAATGAGAAAAGCAACGGGACCTCTCTGTAATTCATTTAAAATTTTATTATGTGTTGGGTTTGGCCATGGGTATTCCCTTTAAATTTTGATGCCATTCAAGCCCAGCAGAATGTTGGTAATTTCTCCCTCCAGTTTTTGAATTTCTCCTGCACCTCATTTCTGAAGTGTAATTTTGACCCGAATTAGACATTCTGTAAGGTGTAGAATAGGG 1386 0.4019 MVGGGNSKSDISFAGTFASSAFAACFAEVCTIPLDTAKVRLQLQKQAVLGDVIALPKYRGLLGTVGTIAREEGLSALWKGIVPGLHRQCLNGGLRIALYEPVKNFYVGADHVVDVPLSKKILAGFTTGAMAISVANPTDLVKVRLQAEGKLLPGVPRRYSGSLNAYSTIVRQEGVAALWTGIGPNIARNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLAGLGAGFFAVCVGSPVDVVKSRMMGDSGYKSTLDCFIKTLRNDGPFAFYKGFIPNFGRLGSWNVIMFLTLEQAKKFVKSLESA 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02162 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 215 298 IPR018108 -
Pste5g02162 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 115 206 IPR018108 -
Pste5g02162 305 PRINTS Mitochondrial brown fat uncoupling protein signature 18 30 IPR002030 GO:0006839|GO:0031966
Pste5g02162 305 PRINTS Mitochondrial brown fat uncoupling protein signature 287 305 IPR002030 GO:0006839|GO:0031966
Pste5g02162 305 PRINTS Mitochondrial brown fat uncoupling protein signature 169 186 IPR002030 GO:0006839|GO:0031966
Pste5g02162 305 PRINTS Mitochondrial brown fat uncoupling protein signature 99 111 IPR002030 GO:0006839|GO:0031966
Pste5g02162 305 PRINTS Mitochondrial brown fat uncoupling protein signature 46 65 IPR002030 GO:0006839|GO:0031966
Pste5g02162 305 PRINTS Mitochondrial brown fat uncoupling protein signature 212 230 IPR002030 GO:0006839|GO:0031966
Pste5g02162 305 PANTHER MITOCHONDRIAL DICARBOXYLATE CARRIER-RELATED 13 297 - -
Pste5g02162 305 FunFam Mitochondrial uncoupling protein 1 14 303 - -
Pste5g02162 305 Pfam Mitochondrial carrier protein 115 209 IPR018108 -
Pste5g02162 305 Pfam Mitochondrial carrier protein 216 300 IPR018108 -
Pste5g02162 305 Pfam Mitochondrial carrier protein 10 107 IPR018108 -
Pste5g02162 305 Coils Coil 292 305 - -
Pste5g02162 305 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 105 IPR018108 -
Pste5g02162 305 Gene3D Mitochondrial carrier domain 13 304 IPR023395 -
Pste5g02162 305 SUPERFAMILY Mitochondrial carrier 10 294 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02162 Pste-Chr5 14207059 14211434 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02162 1 305 Miscellaneous Gene Families AT3G54110 82.353 0.0 515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02162 5 14207059 14211434 Pste5g02162 5 14207059 14211434 ECH
Pste5g02162 5 14207059 14211434 Pste6g01303 6 5619266 5624826 PCT