Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01236 atgtctgcaatctctaaacaaggagagaacttaagcacaaacaataaagccaacagacacccctcatctgcttcatcacatactaaaaaatgctatttcaatggcaatttcgtgaagatggtggtagaagagctaagaattcaacaagggctagcccttccacttgtggccatgaatttggcttggtttggcaagttagccataacaacagcatttcttggccaccttggggagctgaacttagctggtggtgcactgggattcagtttcgctaatgtcactggcttctctttattgaacggtctaagtggtggcatggaacccatatgtggacaagcacatggagccaacaacgtgaggctccttcacaagacccttctcatgacaaccttgttgttgcttttggtaaccctccccttatctttcttgtggcttaacgttgacaagattttgatttgttttggccaacaacaagagatctcaatagtggccaaaacctatgtttcctatctcatacctgacttgttcatcaagtcacttctctgtcccttaaaagcctaccttagctctcagtgcatgactcttcctaccatgtttagttctgcagtggcactagcatttcacataccggttaacatactactctccaaagccatgggactccgaggagtttctgtagcggtttggataaccgatctcatggttatggttttgctggccatttatgtcgtgattcatgagagaagaaacggcagcattttgtggaagcagggagggtggtgggatcagagcttgaaagattggattaggctaatcaagctttctgggtcgtgttgcctcaacacgtgccttgaatggtggtgctatgagattctactcttgctcactggccacttggcaaatactaaggaagcagtgggggctctagccattgtcttgaactttgactatttgcttttcgcagtgatgctttctctagccacttgtgtttccacacgtgtgtccaatgagcttggtgctaaccgagctggtggtgctcgtaaatcaacacgagtgtctttggcattgggtatcatctcgggttgtattggaggtttgataatggtggcttctagggggatttggggaaaactgttcagccatgataaaggagttataaagggagtgaagaaggcaatgttgttgatggctcttgtggaattgtttaattttcctgtgactgtttgtggtggaattctacgaggaactgcacgaccctggcttggaatgtatgccaatcttggtgggttctatttcctgaccttgccgttgggtgtggtttttgccttcaagcttcacttaggacttgctggactccttataggactcttaattggtgttgctacttgcttcattttgttgttaatatttattgtgagaataaattgggtggaagaagctaccaaggcacagaagttagtatgtaccccacggccacaggtacaggaagttccaagaaatgaggtaaatgatgtcattcaaaccaaggagaatgatcaattacgcagtctcacttgctaa 1560 0.0 MSAISKQGENLSTNNKANRHPSSASSHTKKCYFNGNFVKMVVEELRIQQGLALPLVAMNLAWFGKLAITTAFLGHLGELNLAGGALGFSFANVTGFSLLNGLSGGMEPICGQAHGANNVRLLHKTLLMTTLLLLLVTLPLSFLWLNVDKILICFGQQQEISIVAKTYVSYLIPDLFIKSLLCPLKAYLSSQCMTLPTMFSSAVALAFHIPVNILLSKAMGLRGVSVAVWITDLMVMVLLAIYVVIHERRNGSILWKQGGWWDQSLKDWIRLIKLSGSCCLNTCLEWWCYEILLLLTGHLANTKEAVGALAIVLNFDYLLFAVMLSLATCVSTRVSNELGANRAGGARKSTRVSLALGIISGCIGGLIMVASRGIWGKLFSHDKGVIKGVKKAMLLMALVELFNFPVTVCGGILRGTARPWLGMYANLGGFYFLTLPLGVVFAFKLHLGLAGLLIGLLIGVATCFILLLIFIVRINWVEEATKAQKLVCTPRPQVQEVPRNEVNDVIQTKENDQLRSLTC 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01236 519 PANTHER MULTIDRUG RESISTANCE PROTEIN 38 476 - -
Pste6g01236 519 CDD MATE_eukaryotic 44 482 IPR045069 GO:0042910|GO:1990961
Pste6g01236 519 Pfam MatE 54 213 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pste6g01236 519 Pfam MatE 278 439 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pste6g01236 519 NCBIfam MATE family efflux transporter 55 452 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pste6g01236 519 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01236 Pste-Chr6 5292098 5297325 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01236 6 5292098 5297325 Pste6g01236 6 5292098 5297325 ECH
Pste6g01236 6 5292098 5297325 Pste1g00450 1 1481957 1483561 PCT