Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00450 ATGTGCGACTCCACTTTGTGTGAAAGCAATCCAAATATGTCCACAGACAAAATTCAGGAGCCTGACATGTTCGTCCTTTTGATCCCCAAAACCCCAACAACATGCGAACAGAGCCAAAGTAACCAAAAGCCCCAGAAAACCCATTTTTCCCTGGCCCTCAACGAAGCCATATGCATAGCCAACATAGCATTACCCATGGTCCTCACCGGTCTATTACTCTACTCTCGCTCCATAATATCCATGCTCTTCCTGGGTCGCGTCAGCCAGCTCGCCTTAGCCGGTGGCTCTCTCGCCATTGGATTCGCCAACATCACCGGTTACTCCATTCTCTCCGGCCTCGCCATGGGTATGGAGCCCATTTGCGGCCAGGCTTTTGGGGCCAAACGCTTCAAACTTCTGGGCCTGGCCATGCAGAGGACAACTGTTTTGCTTCTTCTAACTTCAGTTTTGATATCATTCCTGTGGCTGAACATGAAAAAAATATTGGTCCTATGTGGGCAACAAGAAGACATCGCCACGGAAGCTCAATCTTTCATAATTTATTCTCTTCCCGATCTGGTAGCACAATCATTGCTACACCCTTTGCGAATCTACTTACGAAGTCAATCTATAACCCTGCCTCTCACCTTCACTGCTTCTCTGTCTATTCTCCTTCACCTCCCCATCAATTACTTCCTCGTCTCTGTGCTCAAGCTTGGAATCAGAGGCATTGCCTTGGGCGCTGTTTGGACCAATTTCAACCTCGTGCTTTCCTTGATTCTCTACATCAGGGTCTCCGGCATATACAAGAAAACATGGCCAGGTTTTTCCTTCAAGGGTATCTTGAGTGGTTGGAAACCGCTTTTGAATCTCGCCATTCCAAGCTGCATTTCCGTTTGTCTCGAGTGGTGGTGGTATGAAATCATGATTTTACTTTGTGGCTTGTTGATTAATCCCCAAGCAACTGTTGCCTCCATGGGGGTTCTCATTCAAACCACGGCCTTGATATACATTTTCCCCTCTTCATTAAGCTTCGGCGTCTCCACACGTGTTGGGAATGAACTGGGTGCCGAGAATCCTAAAAAGGCTAAACTGGCAGCACTTGTCGGGCTTTGTTTCAGTTACGTGTTGGGATTCTCGGCTTTGTTTTTGGCCGTTTCGGTGAGGCACGTGTGGGCCTCCATGTTCACGCGTGACAGGGAGATCATTGGTTTGACGTCCATGGTGTTGCCCATCATTGGGCTCTGCGAGCTTGGGAATTGTCCGCAAACAACGGTTTGCGGCGTTTTGAGGGGAACCGCCAGGCCCAAGTTGGGAGCCAACATAAACTTGGGTTGCTTCTACCTTGTGGGAATGCCCGTTGCGGTGTGGTTGAGTTTCTTTGCGGGCTTTGACTTCAAAGGCTTGTGGCTAGGTCTGTTGGCCGCTCAAGCCTCCTGTATGGTTACTATGTTGTTCGTTTTGGCTCGCACCAATTGGGAGGGTCAGGTCCAACGAGCCAAGGAACTCACATCTTCCCATGAAGACAATGTGGTGGTGGTTAACGAGCAGAACCAACAAGATGACAATTGTTCCTTCAGTTCCTGCGATACTCAACAGGACTGCTCTCATTCATCATTAGTTTAA 1605 0.4879 MCDSTLCESNPNMSTDKIQEPDMFVLLIPKTPTTCEQSQSNQKPQKTHFSLALNEAICIANIALPMVLTGLLLYSRSIISMLFLGRVSQLALAGGSLAIGFANITGYSILSGLAMGMEPICGQAFGAKRFKLLGLAMQRTTVLLLLTSVLISFLWLNMKKILVLCGQQEDIATEAQSFIIYSLPDLVAQSLLHPLRIYLRSQSITLPLTFTASLSILLHLPINYFLVSVLKLGIRGIALGAVWTNFNLVLSLILYIRVSGIYKKTWPGFSFKGILSGWKPLLNLAIPSCISVCLEWWWYEIMILLCGLLINPQATVASMGVLIQTTALIYIFPSSLSFGVSTRVGNELGAENPKKAKLAALVGLCFSYVLGFSALFLAVSVRHVWASMFTRDREIIGLTSMVLPIIGLCELGNCPQTTVCGVLRGTARPKLGANINLGCFYLVGMPVAVWLSFFAGFDFKGLWLGLLAAQASCMVTMLFVLARTNWEGQVQRAKELTSSHEDNVVVVNEQNQQDDNCSFSSCDTQQDCSHSSLV 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00450 534 Pfam MatE 65 225 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pste1g00450 534 Pfam MatE 287 450 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pste1g00450 534 PANTHER MULTIDRUG RESISTANCE PROTEIN 54 486 - -
Pste1g00450 534 NCBIfam MATE family efflux transporter 65 463 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pste1g00450 534 CDD MATE_eukaryotic 55 492 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00450 Pste-Chr1 1481957 1483561 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00450 1 1481957 1483561 Pste1g00450 1 1481957 1483561 ECH
Pste6g01236 6 5292098 5297325 Pste1g00450 1 1481957 1483561 PCT