Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01094 CCTAAGAGTGAGAGCTGCAGCGACTCTGTTTACCTTCCAAGGGATGAATCATTTGGTCACTTGAAGTCCTCTACATCTCAGAATGTGATACCTCAATTACAATCCGCACTCAGACTAGAATTCAATGACCCAGAGTTTACTAGCTTTGAAGACGTGCGTGGACTCTATGATGGTGGAATTAAGTTGCCCACTGATATACTTAGCGATCTTAGTCCTATACCATTGTTCAGTGACCTATTCCGAACTGATGGGGAACAAGTGCTTAAGTTTCCACCACCTAAAAATTTTGCAAGAGAGATGATTGCTGGTGTAAATCCTCACATTATCAAAAGACTTGAGGCCATCCAAAACAACAAATTGTTCATACTAGACCACTACAACACACTCATTCCATATTTGAGGCGGATAAACGCAACTGCGACAAAAGTATATGCTACTAGAACCATCCTTTTCTTGCAAGATAACGGAACCTTAAAACCGTTGGCCATTGAGCTAAGTAAACCACATCCTCAGGGTGATAATTATGGTCCTATTAGTAACGTTCATCTTCCAGCGGAACAAGGCGTTGAAGCTTCCATTTGGCTACTTGCTAAGGCTTATGTCATCGTAAATGACTCTTGCTATCACCAGCTTGTCAGCCACTGGTTAAACACTCATGCAGTTGTTGAGCCATTTGTCATAGCAACAAACAGGCATTTTAGTGTTGTTCACCCTATTCACAAACTTCTTCTTCCACACTACCGTGACACCATGAACATCAATGCACTTGCAAGGAATGTCCGTATTATCAAATCAACATTCTTGTGGGGACGCTATTCTTTGGAAATGTCTGCTGTTGTATATAAGGATTGGGTTTTTCCTGAGCAAGCACTACCTGCCGATCTTGTTAAAAGAGGCATGGCTGTTGAGGATTCTTCTTCTCCACATGGCCTCCGTCTTTTGATTGAGGACTATCCTTATGTTGCTGATGGACTAGAAATTTGGGGTGTTATCAAGTCATGGGTGCAAGAATATGTGTTTTTCTACTATAAGTCGACGATAATCGAACTCCAAGCCTTTTGGAAAGAACTTGTAGAGGTTGGTCATGGTGACAAGAAAAATGAGACATGGTGGGTAAAGATGCAAACTCGCCAAGAGTTGATTGAGTCATGCACCACCCTCATATGGACTGCTTCAGCCCTTCATGCAGCTGTTAATTTTGGGCAATATCCTTATGGTGGTTACATCCTTAACCGACCAACTCTTAGTAGGCGTTTCATGCCTGAGATAGGATCACCTGAGTATGATGAGCTTGCCAAGAGCCCTCAGAAGGTGTATCTGAAAACAATTACAGGGAAGACTGAAGCCCTTAAAGACCTTACAATCATAGAGGTCTTGTCAAGGCATGCTTCTGACGAGTTGTACCTTGACAGAGAGATGGTGTCAGAAATTGAGCAAAACTCATCCAAAGGAACAATGATGAGACTCGAGGAACCGATATGGCCCTGTGAAGATGCCCTACACATTGCTTTATCCTTCCAGCGAGGAAGGATTAACTTTCAGAGGCATTCC 1551 0.4275 PKSESCSDSVYLPRDESFGHLKSSTSQNVIPQLQSALRLEFNDPEFTSFEDVRGLYDGGIKLPTDILSDLSPIPLFSDLFRTDGEQVLKFPPPKNFAREMIAGVNPHIIKRLEAIQNNKLFILDHYNTLIPYLRRINATATKVYATRTILFLQDNGTLKPLAIELSKPHPQGDNYGPISNVHLPAEQGVEASIWLLAKAYVIVNDSCYHQLVSHWLNTHAVVEPFVIATNRHFSVVHPIHKLLLPHYRDTMNINALARNVRIIKSTFLWGRYSLEMSAVVYKDWVFPEQALPADLVKRGMAVEDSSSPHGLRLLIEDYPYVADGLEIWGVIKSWVQEYVFFYYKSTIIELQAFWKELVEVGHGDKKNETWWVKMQTRQELIESCTTLIWTASALHAAVNFGQYPYGGYILNRPTLSRRFMPEIGSPEYDELAKSPQKVYLKTITGKTEALKDLTIIEVLSRHASDELYLDREMVSEIEQNSSKGTMMRLEEPIWPCEDALHIALSFQRGRINFQRHS 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01094 517 ProSitePatterns Lipoxygenases iron-binding region signature 2. 236 246 IPR020834 GO:0016702|GO:0046872
Pste6g01094 517 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 1 517 IPR013819 GO:0016702|GO:0046872
Pste6g01094 517 SUPERFAMILY Lipoxigenase 2 469 IPR036226 -
Pste6g01094 517 PRINTS Lipoxygenase signature 229 249 IPR013819 GO:0016702|GO:0046872
Pste6g01094 517 PRINTS Lipoxygenase signature 191 208 IPR013819 GO:0016702|GO:0046872
Pste6g01094 517 PRINTS Lipoxygenase signature 209 226 IPR013819 GO:0016702|GO:0046872
Pste6g01094 517 Pfam Lipoxygenase 113 481 IPR013819 GO:0016702|GO:0046872
Pste6g01094 517 Pfam Lipoxygenase 5 113 IPR013819 GO:0016702|GO:0046872
Pste6g01094 517 Gene3D - 112 186 - -
Pste6g01094 517 Gene3D - 187 489 - -
Pste6g01094 517 PANTHER LIPOXYGENASE 113 480 IPR000907 GO:0016702|GO:0034440|GO:0046872
Pste6g01094 517 PRINTS Plant lipoxygenase signature 88 104 IPR001246 GO:0016491
Pste6g01094 517 PRINTS Plant lipoxygenase signature 43 64 IPR001246 GO:0016491
Pste6g01094 517 Gene3D - 18 99 IPR027433 -
Pste6g01094 517 ProSitePatterns Lipoxygenases iron-binding region signature 1. 209 223 IPR020833 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01094 Pste-Chr6 4493466 4495820 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01094 1 469 Acyl Lipid Metabolism Gene Families AT3G22400 52.477 0.0 551
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03510 3 27630084 27634021 Pste6g01094 6 4493466 4495820 PCT