Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01021 ATGACTACTGATAGGGTTCACCCTTCGGCCAAAACCACAACCGCCACAAAATCCCAGATGTCGGGCGCCAACCGCCCCACGTACCGCCCACAACTGCAGCAGAGGAGGAGCCGAGGCTGCATCTCCACCCTCTGCTGCTACCTCCTCCTCATCCTGATATTCCTAATCCTCGTGGTGGGAGCGGCGGGCACCGTCCTATACTTCTTCTACCACCCACAGCGGCCAACATACTCAGTCACCTCCCTCAAACTAACCTCCTTCAAGCTCACCACTCCCTCCAGCATCAACGCCAAGTTCGACCTCACAATCTCCACCACAAACCCCAACGACAAAATCACCTTCTCCTACGACCCCACCACCGTATCGCTCCTCTCCGGCGACACCCCCCTGGCGAGCGCCACCATCCCCTCCTTCCTCCACCGCCAGAAGAACACAACCCTGCTGGAAGCGGATGTTAGCAGCAGGGAGGAAGCTTTGGATAGCGACACAGCAATTCAGTTGAAGAGGAGCTTTAAAAGAAAGAGGGAGGTGGCGCTGAAGGTGAAGTTGGAGACCAAGGTGGAGGCCCACATGAGCTTCTTCCAGACACCGCGCGTCGGAATCACCGTATTGTGCGACGGCGTGGCCGTCTCCCTGCCCCTCCCCGACGCCGACAAACCGGCCACGGCTTCCGCTGAGAACACGGTCTGCCAAGTGGACGTCAGGTTCAAGGTCTGGAAATGGACCGTTGGATGA 735 0.5837 MTTDRVHPSAKTTTATKSQMSGANRPTYRPQLQQRRSRGCISTLCCYLLLILIFLILVVGAAGTVLYFFYHPQRPTYSVTSLKLTSFKLTTPSSINAKFDLTISTTNPNDKITFSYDPTTVSLLSGDTPLASATIPSFLHRQKNTTLLEADVSSREEALDSDTAIQLKRSFKRKREVALKVKLETKVEAHMSFFQTPRVGITVLCDGVAVSLPLPDADKPATASAENTVCQVDVRFKVWKWTVG 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01021 244 MobiDBLite consensus disorder prediction 1 31 - -
Pste6g01021 244 Gene3D - 65 202 - -
Pste6g01021 244 SUPERFAMILY LEA14-like 56 189 - -
Pste6g01021 244 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 7 220 - -
Pste6g01021 244 Pfam Late embryogenesis abundant protein 102 203 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01021 Pste-Chr6 4123764 4124498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01021 33 205 EF-hand Containing Proteins AT5G21130 21.264 1.42e-08 52.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01021 6 4123764 4124498 Pste6g01021 6 4123764 4124498 ECH
Pste3g03547 3 27873326 27874604 Pste6g01021 6 4123764 4124498 PCT