Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03547 ATTCAGAAGATTTGAGCCACAAGAAGATGACAGACAGGGTGTACCCGTCGGCAAAGCAAGCAGGGGCAAATCAATCATTCCCAGCAACAAAAGCCCAACAGTACGGCGCCACACGCCCTACATACAGGCCGCAGCCCCACCACGGTGGCCGGAGGAAGCGGCGTTGGCGTTGCTGCTGCACCTTCTGCTTCTGGCTAATCCTCATCGTGCTCATAATCCTCCTCCTGATCGGGGTGGCCGGCACGGTGTTCTACCTGCTGTACCGGCCACACCGCCCCAGCTTCACCGTGACATCGCTGAAACTGTCGTATCTGAACCTGAGCTCATCCTCCACCCTGAACTCCCGCTTCGACCTCACCGTCTCCGCCACGAACCCGAACAAGAAGATCCTCTTCGCGTACGAGCCCACCTCGGTGTCCATCCTCTCCGGCGATGTGGACGTGGGCGACGGCACCGTCCCCGCCTTCGAGCACGGCAAGAAGAACACGACGCTCATAAAAGCCTCCATTACGAGCTCCGACCACGCGCTCCAGAGCGACCAGGCCTCACCCTTGAAGTCCACCATGAAGACCAAGAACGGCTTTCCTCTCAAGGTCAATTTGGAAACCAAAGTGAAGGCCAAAATGGGAAACTTGAAAACCCCCAAGGTCAGAATCCGTGTCTCCTGCGACGGAATCAGAGTCACTGTTCCCGCCGGTAACAAACCCGCCACCGCCTCCACTTCTAACTCCCACTGCCACGTCTATGTCAGGTTCAAGATCTGGAAGTGGACCAAGAGAAATTATTGGAAGATGGATGCGGGGCTAGTGACTCACGAGCTTCCTCCCAACAAAAAGGAGTCTGCTAAAGTATCAATGGGAGATCAAAGTTGTAGAATGTCAGAGGAAATAGGTGATAAT 899 0.5528 MTDRVYPSAKQAGANQSFPATKAQQYGATRPTYRPQPHHGGRRKRRWRCCCTFCFWLILIVLIILLLIGVAGTVFYLLYRPHRPSFTVTSLKLSYLNLSSSSTLNSRFDLTVSATNPNKKILFAYEPTSVSILSGDVDVGDGTVPAFEHGKKNTTLIKASITSSDHALQSDQASPLKSTMKTKNGFPLKVNLETKVKAKMGNLKTPKVRIRVSCDGIRVTVPAGNKPATASTSNSHCHVYVRFKIWKWTKRNYWKMDAGLVTHELPPNKKESAKVSMGDQSCRMSEEIGDN 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03547 291 MobiDBLite consensus disorder prediction 270 291 - -
Pste3g03547 291 MobiDBLite consensus disorder prediction 1 42 - -
Pste3g03547 291 MobiDBLite consensus disorder prediction 9 31 - -
Pste3g03547 291 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 11 229 - -
Pste3g03547 291 Pfam Late embryogenesis abundant protein 111 214 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03547 Pste-Chr3 27873326 27874604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03547 33 234 EF-hand Containing Proteins AT5G21130 28.571 2.25e-19 84.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03547 3 27873326 27874604 Pste6g01021 6 4123764 4124498 PCT