Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01012 GCCACTTATAGGTTGGGAAGAAGCAGCTTCTTCAGAAAGTGAGTGCTTTTTCTGGCCCGTGAGATTTCATGGCTTTAGTTGCTGCAGTCAAATTCTTCTTGTGCCTACTTCTATGGCTCTTGAACTGTCTACGTCCCTGTAAAGGTAATGATGAGCAGTGGCATGAAAATAGATACCCATTTATCAGAAATGCAAGCTCATTCTCATCACCATCAATATCAACTACCACCACTAATAATGCCTATGATTACATAATAGTGGGAGGTGGCACAGCAGGGTGTCCCTTGGCTGCAACCCTCTCACAGAACTTCAGTGTTCTGATGCTTGAAAGAGGGGGTGTTCCTTTCACCAACCCCAATGTTTCATTTCTAGGGAACTTCCACATTGCCTTGGCAGACATTTCACCAACTTCAGCTTCTCAATGTTTCATTTCAACTGATGGAGTCTTTAATTCAAGGGCAAGGGTCTTGGGAGGTGGCAGTTCTATCAATGCTGGCTTCTACACTAGAGCAAACCCAAGGTTTATAAAAAAGGTGGGGTGGGATGCGAAGCTAGTAAAAGAGTCATACCCATGGGTTGAGAAGCAAATTGTTCACCGTCCAAAATTTTCAGCTTTTCAGAGAGCATTTAGAGACAGTCTTCTAGACTCTGGTGTGTCACCTTTTAATGGCTTCACCTATGATCATATCTATGGAACCAAGGTTGGTGGAACCATTTTTGACAGATTTGGCCGCCGCCACACTGCTGCTGAACTGCTTGCTTCAGGGAACCGTGACAGACTTACTGTGCTGGTCTATGCCACTGTCCAAAAGATTGTGTTTGATACAAGAGGAAAGAGACCAAAAGCTGTGGGAGTTATTTTCCAGGATGAACATGGGAAACAGCATGAGGCTATGTTGACAAATGATAAGCACAGTGAAGTGATTATGTCTAGTGGGGCAATTGGGACTCCTCAATTGCTAATGCTTAGTGGAATTGGGCCAAAAGCCGAACTCCAGAAGTTGAACATCCCAGTGGTCCTTGACAACCACTTTGTTGGGAAAGGAATGGTTGACAATCCCATGAACACTATGTACATTCCTTATAATAGACCGGTTTATCAGTCCCTCATCGAAACTGTTGGCATCACCAAGATGGGTGTGTACATTGAGGCTAGCAGTGGGTTTAGTCAGTCCAATGATAGCATTCACTGCCACCATGGTATCATGTCAGCAGAGATTGGGCAGCTGTCAACAATTCCTCCAAAGCAAAGATCACGAGAATCTGTTGAAGAATTTATTAAGAACAAGAAAGACATACCAGTTGAAGCATTCAAGGGAGGGTTTATTTTGTCAAAAGTTGCGGATCCTTGGTCAGTAGGTGAGCTGAAGCTGGTAAACAGCAATGTGAATGACAACCCAGCCGTTACCTTCAACTACTTCAGTCATCCATATGATCTCCATCGGTGCGTGATGGGGATACGCTTGGCCATTAAGGTAGTCCAGTCAAAACACTTCACAAACTACACTTTGTGTGAAAGACAAACCGCAGAGAAACTGCTGAATCTCTCAGTCAAGGCTAATGTGAACTTCATACCAAAGCATCCCAACGACACAAAGTCCATCATGCAGTTCTGCAAAGACACTGTGATAACAATTTGGCACTATCATGGAGGGTGCCATGTGGGGAAGGTAGTCAGCCCTGATTACATGGTTCTTGGTGTTGACAGGCTCCGTGTGGTAGATGGCTCAACATTTGACGAATCACCAGGAACAAATCCTCAAGCCACTGTCATGATGATGGGCAGGTACATGGGGCTCAAGATTTTGAGAGATAGGTTAGGGAAATTGGCTGGTATATAAAGGATGAATGGAATGCCTTGTGTGAACATCATATCAAATATTAAAAAAAGGTGGTCAAATCAGACAGAAGCATGGTTCTGCATCAAGAAAGAAAAACTGTTAGCGGTAGGATTGATTTCTAGTGAGAGTAAAATTAGTAGTCAACAAGGTCATAGTCATTTTGGGACGAAAAAGTTATTGTAATGACTTTTTATTTCCAAGCAAAAATAGAATCATGATATTTAGTAATTTGAAG 2076 0.4302 MALVAAVKFFLCLLLWLLNCLRPCKGNDEQWHENRYPFIRNASSFSSPSISTTTTNNAYDYIIVGGGTAGCPLAATLSQNFSVLMLERGGVPFTNPNVSFLGNFHIALADISPTSASQCFISTDGVFNSRARVLGGGSSINAGFYTRANPRFIKKVGWDAKLVKESYPWVEKQIVHRPKFSAFQRAFRDSLLDSGVSPFNGFTYDHIYGTKVGGTIFDRFGRRHTAAELLASGNRDRLTVLVYATVQKIVFDTRGKRPKAVGVIFQDEHGKQHEAMLTNDKHSEVIMSSGAIGTPQLLMLSGIGPKAELQKLNIPVVLDNHFVGKGMVDNPMNTMYIPYNRPVYQSLIETVGITKMGVYIEASSGFSQSNDSIHCHHGIMSAEIGQLSTIPPKQRSRESVEEFIKNKKDIPVEAFKGGFILSKVADPWSVGELKLVNSNVNDNPAVTFNYFSHPYDLHRCVMGIRLAIKVVQSKHFTNYTLCERQTAEKLLNLSVKANVNFIPKHPNDTKSIMQFCKDTVITIWHYHGGCHVGKVVSPDYMVLGVDRLRVVDGSTFDESPGTNPQATVMMMGRYMGLKILRDRLGKLAGI 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01012 590 Gene3D - 59 572 IPR036188 -
Pste6g01012 590 Pfam GMC oxidoreductase 59 331 IPR000172 GO:0016614|GO:0050660
Pste6g01012 590 PIRSF Alcohol_oxidase 39 589 IPR012132 GO:0050660
Pste6g01012 590 SUPERFAMILY FAD-linked reductases, C-terminal domain 327 529 - -
Pste6g01012 590 PANTHER OSJNBA0019K04.7 PROTEIN 11 584 - -
Pste6g01012 590 Gene3D - 176 522 - -
Pste6g01012 590 Pfam GMC oxidoreductase 427 573 IPR007867 GO:0016614
Pste6g01012 590 SUPERFAMILY FAD/NAD(P)-binding domain 50 582 IPR036188 -
Pste6g01012 590 ProSitePatterns GMC oxidoreductases signature 2. 290 304 IPR000172 GO:0016614|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01012 Pste-Chr6 4087986 4099161 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01012 8 585 Miscellaneous Gene Families AT3G56060 49.313 0.0 541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03549 3 27898195 27904120 Pste6g01012 6 4087986 4099161 PCT