Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03549 GGCAGAAGGGCCAAAGAGGGAGTTGGGACTTAGAGGTTGAAGAGGGTTTCATGCTTGTGATCAGAAACTGAATGGCGTCCATTGGTGCAGTAAAATACTTGGTGTGCTTACTTATGTGCAGCCTCGTGAAGCATTCTCAAGGTGGAGGAGGAGGAGGTGGTAGTAAGCAAAAGAAGTGGAGTGATGGGTATCCATTTGTGAGAAGAGGAAGCACATTCTCATCGGGAAGAGGGTATTATGACTATATAATAGTGGGAGGTGGCACAGCAGGGTGTCCATTGGCTGCAACACTGTCTCACAACTTCAATGTGCTCCTGCTAGAAAGAGGAGGAGTCCCTTTCAACAACCCTAATGTCTCATTTCTCCACAACTTCCATATTACATTGGCCGACGTTTCGCCTTCTTCCCCTTCTCAGTACTTCATTTCCACTGACGGGGTCCTCAATGCTAGGGCTAGGCTTTTGGGGGGAGCCACTTCCATCAACGCTGGCTTCTACTCCAGAGCACACCCTAGATTTATAAGGAAGATGGGGTGGGATCGAAAGTTAGTGAATGAGTCATATCGGTGGATTGAGAAGCAGATTGTTCATCGGCCCAAGTTTTCACATTGGCAGAGAGCGGTTAGGGATGGGCTTCTAGATGCCGGTGTGTCTCCTTTCAATGGCTTCACTTACGATCATAAGTATGGAACCAAAGTTGGCGGAACCATTTTTGACAGATTTGGTCGTCGCCACACGGCTGCTGAATTGCTTGCTTCTGCCAACCCTCATAAACTTTCTGTTTTCATCCATGCCACTGTTCAAAACATTCTTTTTCATACAACAGGAAAAAGACCAAAAGCTATTGGGGTTATTTTCAAGGATGAAAATGGGAAGCAGCATGAGGCATTTTTGGGAAATAAAAGGCAGAGTGAGGTGATTGTTTCTAGTGGGGCAATTGGAACTCCTCAATTACTAATGCTCAGTGGAATTGGTCCCAAAGAAGAGCTTCAGAAATTTAACATCCCTGTGGTGCTTAACAACCAATTTGTTGGGAAAGGCATGGCTGATAACCCTATGAACACAATATTTGTTCCTTCCAAGAGACCAGTTCAGCCGTCACTTATAGAAACTGTTGGTATAACCAATTTGGGTGTGTACATTGAGACTAGTTGTGGGTTTAGCCAGTCCAAAGAGAGCATTCACTGCCACCATGGTATATTGTCAGCTGAGATTGGGCAGTTGTCCACAATTCCACCAAAACAAAGATCACTTGAAGCTGTTAAGGCTTTTGTAAAGAGCAAGAAAGAGATACCAGTTGAAGCATTCAGGGGAGGATTCATATTGTCAAAAGTTGCTAATCCTTGGTCAGCAGGTGAGCTTAGGTTGATAAACACCAATGTGGAGGACAACCCTGCTGTTACCTTTAACTACTTCAGTCACCCCTATGATCTTAAGCGTTGTGTGGAGGGAATTCGCTTGGCAATAAAGGTTGTCCAATCAGAATATGTCAAAAACTACACTCTGTGTGACAAACAAACTACTGAAAAGATGCTCAATCTCACCTTGAAGGCCAATATTAACCTCATTCCCAAGCATGCCAATGACACAAAATCACTAGAGCAGTTTTGTAAAGACTCTGTGATCACTATTTGGCATTATCATGGTGGGTGCCATGTGGGGAAGGTAGTAAACTCTGAGCATAAGGTTCTTGGTATTGACAGACTTCGTGTGGTAGATGGCTCAACATTTACCGAGTCACCAGGAACCAACCCTCAAGCTACTGTGATGATGATGGGAAGGTACATGGGACTAAAGATTTTACTGGACAGGTTGGGGAAATTGGCTGGTATTTAAGGATGGGTGTGTAATACGAAAACTATCTCAAGAGAAATGAGAACAAGGGTGTAATTCGAAGACAAGAAGAGTTACGAGCTTGTAGGACTGGAAATTGTTATATTTTATTTGTTAATCGTCAGTGAAGATTGATTATTAAATCATCAAGTAAGTTCTGGATTTTCTAAAAACAATTTCATGCAACTCCTGGAAGTCAGGTTTTATCTTTAACTAATTTCTATAAAATAATTTGAA 2069 0.4287 MASIGAVKYLVCLLMCSLVKHSQGGGGGGGSKQKKWSDGYPFVRRGSTFSSGRGYYDYIIVGGGTAGCPLAATLSHNFNVLLLERGGVPFNNPNVSFLHNFHITLADVSPSSPSQYFISTDGVLNARARLLGGATSINAGFYSRAHPRFIRKMGWDRKLVNESYRWIEKQIVHRPKFSHWQRAVRDGLLDAGVSPFNGFTYDHKYGTKVGGTIFDRFGRRHTAAELLASANPHKLSVFIHATVQNILFHTTGKRPKAIGVIFKDENGKQHEAFLGNKRQSEVIVSSGAIGTPQLLMLSGIGPKEELQKFNIPVVLNNQFVGKGMADNPMNTIFVPSKRPVQPSLIETVGITNLGVYIETSCGFSQSKESIHCHHGILSAEIGQLSTIPPKQRSLEAVKAFVKSKKEIPVEAFRGGFILSKVANPWSAGELRLINTNVEDNPAVTFNYFSHPYDLKRCVEGIRLAIKVVQSEYVKNYTLCDKQTTEKMLNLTLKANINLIPKHANDTKSLEQFCKDSVITIWHYHGGCHVGKVVNSEHKVLGIDRLRVVDGSTFTESPGTNPQATVMMMGRYMGLKILLDRLGKLAGI 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03549 587 Gene3D - 173 519 - -
Pste3g03549 587 ProSitePatterns GMC oxidoreductases signature 2. 287 301 IPR000172 GO:0016614|GO:0050660
Pste3g03549 587 Pfam GMC oxidoreductase 424 570 IPR007867 GO:0016614
Pste3g03549 587 PANTHER OSJNBA0019K04.7 PROTEIN 21 581 - -
Pste3g03549 587 Pfam GMC oxidoreductase 56 328 IPR000172 GO:0016614|GO:0050660
Pste3g03549 587 Gene3D - 56 569 IPR036188 -
Pste3g03549 587 SUPERFAMILY FAD/NAD(P)-binding domain 55 577 IPR036188 -
Pste3g03549 587 SUPERFAMILY FAD-linked reductases, C-terminal domain 324 526 - -
Pste3g03549 587 PIRSF Alcohol_oxidase 47 585 IPR012132 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03549 Pste-Chr3 27898195 27904120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03549 45 582 Miscellaneous Gene Families AT3G56060 50.738 0.0 548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03549 3 27898195 27904120 Pste3g03549 3 27898195 27904120 ECH
Pste3g03549 3 27898195 27904120 Pste6g01012 6 4087986 4099161 PCT