Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01007 ACCCCGATCATGGAAGGCTTTGAGGACCTCTACGTCACTGATCTTATGAACATTGATTCAGGTTCTCGACACCTCCCACCTGAAAATGAAGGGCAATTGGAATATTCTATGGCAGCTAAATATCCCTCCCCGACTTTGTACCTTCTTCTGGATATTATGTCGTGGTTGCCTCCCTATTCGTTTAAACCTCCAAGCCTGTGGATCAGTGAAGCTTTAACAGGCGAGCTTCTGCCAACCATAAGAAAAAGTAAAAAGGGAAAAAAAAGGAGAAGCATAATTTGGAATGAAGTATATGTGAGTAGTTATGGTGATGGCATGGGAATGGTAATAATACCTTTGTTTTTCAATGCTGGTGGGAGTATTGGGCTTGAATTGTTGAATGGAATGTGGAAGCGCGAAACAAATAGTGAGGCTTGTTGTTCAACTCAGCTTATTGATGGAGATGGTACATTCAATATTTCTGGAGTTGAAAAATTCATGAAGGAGGTGAAGTTGGCTGAATGTGGGCTTTCGTACGCTGTTGTTTCTATAATGGGTCCGCAAAGTAGTGGCAAGAGCACACTATTAAATAATTTGTTTAATACCAACTTCAAAGAGATGGATGCTTTCAAGGGAAGGTCTCAAACAACCAAAGGAATCTGGATGGCTAGATGTACGGGCATAGAGCCTTGTACACTTGTGATGGATTTGGAGGGTACAGATGGAAGAGAACGTGGAGAGGATGACACTGCTTTTGAAAAGCAGAGTGCTCTATTTGCTCTTGCTGTCTCAGATATTGTCCTAATAAACATGTGGTGCCATGACATTGGCCGTGAGCAAGCTGCAAATAAGCCACTTTTGAAAACTGTCTTTCAGGTCATGATGAGATTGTTTAGTCCACGAAAAACAACATTGTTGTTTGTCATACGTGATAAAACAAGGACACCACTTGAAAATTTAGAACCTGTTTTGAGAGAAGATATTCAGAAGATATGGGACTCTGTTCCTAAACCACTGGCCCACAAGGAAACCCCACTAAGTGAATTTTTCAACGTTGAAGTTGTTGCTCTTTCTAGTTACGAAGAGAAGGAAGAGCAATTTAAAGAGCAGGTTGCCAACTTGCGACAACGATTCCATCAGTCTATTGCTCCTGGTGGACTTGCAGGCGATCGACGTGGAGTAGTTCCCGCTTCTGGATTTGCTTTTAGCTCTGAGCATATCTGGAAAGTCATTAAGGAGAACAAAGATCTTGACCTTCCTGCACATAAGGTCATGGTTGCTACTGTACGATGTGAAGAAATTGCCAATGAGAAATACGCCTCTTTTGTTGCAAATGAGGATTGGTGTCAATTGGAAGAGGCTGTGCAATCTGACCCTATTCCTGGATTTGGGAAAAAGCTTAGTTCACTCCTTGATACTTTTTTATCAGAGTATGATGCCGAAGCCACCTATTTTGATGAAGGTGTGAGATCTGCCAAACAAAAGCAACTACAAGAAAAATTGTTCCAACTTGTCCAACCAGCATTTCAATCTGCGCTGGGACATATAAGATCTAGAACTTTGGATAGATTGAAGGTGTCATTTGATAAAGCTTTGATAGGAGGGGAAAGGTTTGCTGTGGCTGCTAATAATTGCATTGGGTCTTCTATGGTTCAATTTGATGAAGCATGTGCAGATGTTGTTATTGAACAGACAAACTGGGATACATCTAAAGTACGTGAGAAACTGCTGCGTGATATTGATGCACATATTGCAACTGTACGAGCAACCAAGATTTCTGAACTTACTTCATCATTTGAGGAAAAACTTAAACAAGCTTTGTCTGGACCTGTCGAAGCTCTTTTGGATGGAGCTAATAGTGATACATGGTCATCAATAAGGAACCTTCTTAGGCGTGAGACAGAATCAGCTGTTTCTGGGTTCTCTGCTGCACTTACTGGGTTTGATATGGATGAGGAAACAAGGCAGAACATGATTTTGAGTTTAGAGGATTATGCAAGAGGTCTGGTAGAAGGAAAGGCCAGGGAAGAAGCTGGAAGAGTTCTAATCCGCATGAAGGATAGGTTTACGATGTTGTTTAGCCATGATTCTGATTCAATGCCTCGTGTTTGGACGGGTAAAGAAGATATAAGAGCCATCACCAAGACTGCTCGCTCTGCTTCTTTGAAGTTGCTATCTGTTATGGCTGCAATTCGTTTGGATGATGACAACGCTGACAATATCGAGAAGGTATTAGCAGTTGCATTGGTGGATTCATCATCAGGTAGTGCTGGTACAAGGAGCATCACAATGGTTGATCCACTAGCTTCTAGCAGCTGGGAACAGGTTTCATCCTCTAAAACATTGATTACACCTGTCCAGTGCAAGTCTTTGTGGAGGCAATTTAAGACAGAGACAGAGTATAGTGAGGCCAACAAGCGCAACAACAACTGGTTACCTCCCCCATGGGCAATAGCTGCTTTGGTTATCCTAGGATTTAATGAATTTATGACACTCCTAAGAAATCCCTTGTATTTGGGTGTGATCTTTGTTGGTTTTCTTCTCCTTAAAGCCCTATGGGTGCAGCTTGATGTTTCTGGTGAATTTCGCAATGGAGCTCTTCCGGGAATCATATCATTGTCTAGCAAGTTCATTCCAACTATCATGAACCTAATGAAAAAACTAGCAGAGGAGGGACAGAACGGTGCAGCTAACAATCCTCAGAGAACTTCATCAAGAAACAGTTACAATGAGGGTCGTGCTGTTGTGTCATCTAGCGCGTCATCTAACGTGACGGCCTTGGACAATGGAACTGAGTATGCCAGTCCATTAAAAGATGAGTAGGTGAAGAAGATCATCTTGCTCAAAACCAAGATGTCCACTAAATTCATAACATTCAAAGGCATTCATTTTTTTGTGCAAGTGCCGTATACAGGGGGCAATGTTTTATTGCGGCCTAGTTCCCCCTTTAAATAGTTTTCTTTTCCATTCCAATTTAGGTGCTTGGAGAAGTTATTTCATGGTTTTGCAATCAATTTGTTTGTAATTTTATTAGTGTACTGACTGCTTTTTTCTTTCATTTTTGAAAAATTTATTAATTGGATTTGTGTGTTTATATCAGTTTTTTTTTTTTAATGTGATATGCTATAGGCGAATGTGAAATTAAAAATTGAGGGAATCAAGGTTGAG 3147 0.4093 TPIMEGFEDLYVTDLMNIDSGSRHLPPENEGQLEYSMAAKYPSPTLYLLLDIMSWLPPYSFKPPSLWISEALTGELLPTIRKSKKGKKRRSIIWNEVYVSSYGDGMGMVIIPLFFNAGGSIGLELLNGMWKRETNSEACCSTQLIDGDGTFNISGVEKFMKEVKLAECGLSYAVVSIMGPQSSGKSTLLNNLFNTNFKEMDAFKGRSQTTKGIWMARCTGIEPCTLVMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLLFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPLAHKETPLSEFFNVEVVALSSYEEKEEQFKEQVANLRQRFHQSIAPGGLAGDRRGVVPASGFAFSSEHIWKVIKENKDLDLPAHKVMVATVRCEEIANEKYASFVANEDWCQLEEAVQSDPIPGFGKKLSSLLDTFLSEYDAEATYFDEGVRSAKQKQLQEKLFQLVQPAFQSALGHIRSRTLDRLKVSFDKALIGGERFAVAANNCIGSSMVQFDEACADVVIEQTNWDTSKVREKLLRDIDAHIATVRATKISELTSSFEEKLKQALSGPVEALLDGANSDTWSSIRNLLRRETESAVSGFSAALTGFDMDEETRQNMILSLEDYARGLVEGKAREEAGRVLIRMKDRFTMLFSHDSDSMPRVWTGKEDIRAITKTARSASLKLLSVMAAIRLDDDNADNIEKVLAVALVDSSSGSAGTRSITMVDPLASSSWEQVSSSKTLITPVQCKSLWRQFKTETEYSEANKRNNNWLPPPWAIAALVILGFNEFMTLLRNPLYLGVIFVGFLLLKALWVQLDVSGEFRNGALPGIISLSSKFIPTIMNLMKKLAEEGQNGAANNPQRTSSRNSYNEGRAVVSSSASSNVTALDNGTEYASPLKDE 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01007 933 Gene3D - 143 378 IPR027417 -
Pste6g01007 933 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 408 IPR027417 -
Pste6g01007 933 PANTHER PROTEIN SEY1 136 905 IPR008803 -
Pste6g01007 933 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 178 413 - -
Pste6g01007 933 MobiDBLite consensus disorder prediction 887 923 - -
Pste6g01007 933 Coils Coil 350 370 - -
Pste6g01007 933 CDD GBP 168 371 - -
Pste6g01007 933 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 169 384 IPR030386 GO:0005525
Pste6g01007 933 Hamap Protein SEY1 [SEY1]. 141 886 IPR008803 -
Pste6g01007 933 Pfam Sey1 three-helix bundle domain 455 884 IPR046758 -
Pste6g01007 933 MobiDBLite consensus disorder prediction 885 933 - -
Pste6g01007 933 FunFam Protein ROOT HAIR DEFECTIVE 3 homolog 150 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01007 Pste-Chr6 4057774 4069423 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03552 3 27925616 27934844 Pste6g01007 6 4057774 4069423 PCT