Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03552 CTAAGATTGAATGTGCTTATCCAGCAAGCTATGAGAAATGTTGTTCCACTCAACTTATTGACGGAGATGGTATGTTCAATGTTGCCGGGATTGAAAACTTCATGAAAGAGATTAAATTAAGTGATTGTGGGCTTTCCTACGCCGTAGTTTCTATTATGGGTCCACAAAGCAGTGGTATGTTTTCTTGCCCTCATGGTCTCACTTTTAGATGGATGCATTTAAGGGAAGGCATGTCTCAAACAACCAAAGGAATTTGGATGGCTAAATGTGTTGGCATAGAGCCTTGTACACTTGTGATGGATTTGGAGGGTACGGATGGAAGAGAACGTGGAGAGGTGGATGATACTGCATTTGAAAAGCAGAGTGCTTTATTTGCTTTGGCTATTTCTGATATAGTGTTAATAAACATGTGGTGCCATGACATTGGTCGCGAGCAAGCTGCAAATAAACCGCTTCTCAAAACTGTTTTTCAGGTCATGATGAGATTGTTTAGTCCACGCAAAACTACAATGTTGTTTGTTATACGTGATAAGACAAAAACACCACTTGAAAATTTAGAGCCTGTTTTACGAGGGGATATTCAAAAGATATGGGATTCTGTTCCTAAACCAGATGCTCATAAGGAAACCCTATTAAGTGAATTTTTCATTGTTGAAGTTGTTGCTCTTTCTAGTTTTGAAGAAAAAGAAGAACAATTTAAAGAGCAGGTTGCTACCTTAAGGGAACGATTCTATCATTCTATAGCTCCAGGTGGACTTGCAGGGGATCGGCGTGGAGTAATTCCCGCTTCAGGATTTTGTTTTAGTGCTCAAGAAATATGGAAAATCATTAAAGAAAACAAGGATCTTGACCTTCCAGCACACAAGGTCATGGTTGCTACAGTACGATGTGAAGAAATTGCTAATGAGAAATATGACAGTTTTGCTAGAAACATGGACTGGTGTCAGTTGGAAGAGGCTGTGACGTCTAGCCCTATCCACGGATTTGGAAAAAAGCTAAATTCACTTCTTACTACTTGTCTTTCCGAATATGATGCCGAAGCTACTTATTTTGATGAAGGTGTGAGATCTGCAAAACAAAAACAACTTCAAGAAAAATTGTTCCAACTTGTCCAACCAACATTTCAAATTGCATTGGGACATATAAGGTCAGAAATTTTGGATAAATTCAAGGAAGCATTTGACAAGGCTTTGAATGGAGGGGAAGGGTTTTCTTCTGCTACTAATAAGTGTGTAGAGTCCTATATGGCTCAGTTTGATGAAGGATGTGCAGATGTTGTTATTGAAATAGCAAATTGGGATACATCTAAAGTGAGGGAGAAATTGAGGCGTGATATTGATGCACATGTTACATCAGTACGTGCATCCAAGTTGTCAGAACTTGTTTCATCAAATAAGGAAAAATTGAAGGAAGCTTTATATGGACCTGTTGAGACTCTATTGGATGGAGCTAATAGTGATACTTGGCCATCGATAAGGAAACTTGCCAATCGTGAGACTGAATTAGTTGTTTCTGAATTTTCTAGTGAGCTTATCAGATTTGACATGGATGAGGAAACAAAAAAGAGCATGATTATGAATTTACAAGATTATGCAAAAGGTGTAATAGAAGCCAAGGCTAAGGAAGAAGCTGGTAGAGTTCTAATCCGAATGAAGGAAAGGTTTATGACATTATTTAGTCATGATTCGGATTCAATGCCTCGTATTTGGACGGGAAAAGAAGATATTCGAGCCATCAACAACTCTGCCCGCTCTGCATGCTTGAAGTTGTTGTCTGTAATGACTGTAATTCGTTTAGATGAGGGGGATGACATTTATGATATCGAGAAAATATTAACAGTTGCATTCGCAGAATCATCAAACAATTCTGTTAAAAATAAAAGCATCACAACATTTGAATCATTGGCTTCAAGCACTTGGGAACAGGTACCACCTTCTAAAACATTGATCACACCTGTCCAGTGCAAATCCTTATGGAGGCAATTCAAGATGGAGACAGAATATAGTGTTTCTCAAGCCATTGCTGCCCAGGAAGCCAACAATCGTAGCAACAATTGGTTGCCTCCCCCATGGGCGATTATAGCTTTGCTTATTCTTGGATTTAATGAATTTATGACACTTTTAAGAAATCCCTTGTATATAGGTGTCATATTTGTTGTTTATCTTCTCGTTAAAGCCTTATGGGTGCAGTTGGACATTGCGGGTGAATTCCGCAATGGAGCTCTTCCAGGAATCATTTCCTTGTCTAGCAAGTTAGTTCCGATTATAATGAACATTATCAGAAAATTAGCAGAGGAGGGACAGGGCAATGCCACTAACAATCCTCGTAGAAATCCATCAAAAAGGGTTGTTCCTGCTGGTAATGTTACGTCTTCTAGTGCTTCATCAAGTGTAACCTCATCCACTAATAGACCCGATTATTCTAGTTCATCAAAATATGAG 2441 0.3884 MFNVAGIENFMKEIKLSDCGLSYAVVSIMGPQSSGMFSCPHGLTFRWMHLREGMSQTTKGIWMAKCVGIEPCTLVMDLEGTDGRERGEVDDTAFEKQSALFALAISDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTMLFVIRDKTKTPLENLEPVLRGDIQKIWDSVPKPDAHKETLLSEFFIVEVVALSSFEEKEEQFKEQVATLRERFYHSIAPGGLAGDRRGVIPASGFCFSAQEIWKIIKENKDLDLPAHKVMVATVRCEEIANEKYDSFARNMDWCQLEEAVTSSPIHGFGKKLNSLLTTCLSEYDAEATYFDEGVRSAKQKQLQEKLFQLVQPTFQIALGHIRSEILDKFKEAFDKALNGGEGFSSATNKCVESYMAQFDEGCADVVIEIANWDTSKVREKLRRDIDAHVTSVRASKLSELVSSNKEKLKEALYGPVETLLDGANSDTWPSIRKLANRETELVVSEFSSELIRFDMDEETKKSMIMNLQDYAKGVIEAKAKEEAGRVLIRMKERFMTLFSHDSDSMPRIWTGKEDIRAINNSARSACLKLLSVMTVIRLDEGDDIYDIEKILTVAFAESSNNSVKNKSITTFESLASSTWEQVPPSKTLITPVQCKSLWRQFKMETEYSVSQAIAAQEANNRSNNWLPPPWAIIALLILGFNEFMTLLRNPLYIGVIFVVYLLVKALWVQLDIAGEFRNGALPGIISLSSKLVPIIMNIIRKLAEEGQGNATNNPRRNPSKRVVPAGNVTSSSASSSVTSSTNRPDYSSSSKYE 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03552 790 Hamap Protein SEY1 [SEY1]. 1 744 IPR008803 -
Pste3g03552 790 Gene3D - 7 232 IPR027417 -
Pste3g03552 790 FunFam Protein ROOT HAIR DEFECTIVE 3 homolog 1 254 - -
Pste3g03552 790 Pfam Sey1 three-helix bundle domain 304 742 IPR046758 -
Pste3g03552 790 MobiDBLite consensus disorder prediction 744 790 - -
Pste3g03552 790 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 228 IPR027417 -
Pste3g03552 790 Coils Coil 199 219 - -
Pste3g03552 790 CDD GBP 17 223 - -
Pste3g03552 790 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 1 233 IPR030386 GO:0005525
Pste3g03552 790 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 29 262 - -
Pste3g03552 790 PANTHER PROTEIN SEY1 1 775 IPR008803 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03552 Pste-Chr3 27925616 27934844 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03552 3 27925616 27934844 Pste6g01007 6 4057774 4069423 PCT