Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00458 ATGATGGACACCACTTCATCCCCTTTGTCCCTCCAAAACCAAAAGGCATCCTTTCAAGACCTTCCAGAAGCTTCCCCCAAGCCTTACAAGAAGGGCTTTGTGGCCACTCTAATGGGAGGAGCTTCCACCCCTTCTTTCAAAGAAGACAACTACTTTGTGTCCCTCTTAAGGTCCTCAGAGAGAAAGGCCCTTCAGGAGCTAAAAGACAAGCTCAAAGCTTCATTTGATGAGTCTCCCTCTGATGCCTCCATGTGGGGCATTCCCCTCCTTGGTGGTGATGAAAAAGCTGATGTTATTCTCCTCAAGTTTCTTAGAGCAAGGGACTTCAGGGTTGGTGATGCCCTCCACATGCTTATAAAGTGTCTTGCTTGGAGGAAAGACTTTGGTGCTGACACCATTTTGGAAGAGGATTTGGGGTTTAAGGAGCTTGAAGGTGTGATAGCATATATGCAAGGGTATGACAAAGAGGGCCACCCTGTGTGCTACAATGCTTATGGATTGTTCAAAGACAAGGAAATGTATGAAAGGGTCTTTGGTGATGAGGAGAAGCTGAAAAAGTTCCTCAGATGGAGGGTTCAGGTTCTTGAAAGAGGCATCAAGGTTCTTCATTTCAAGCCTGGTGGAGTCAATTCCCTCATTCAGGTCACAGACCTCAAAGACATGCCAAAGAGAGAGCTGAGGGTGGCTTCCAATCACATCCTCTCCCTGTTCCAAGACAACTACCCAGAAATGGTGGCTCGCAAGGTTTATGTGGTTTTGTTGTTTTCTTCAAATCAGGAACATGTTGATGTTTTCATCAACGTCCCATGGTACTTCAGCATGTTGTATTCAATGTTCAGTCCTTTTCTTACTCAAAGAACTAAGAGCAAGTTTGTTATCTCTAAGGAAGGAAATGCTGCTGAGACACTCTACAAATTTATTAGGCCTGAGGACATTCCTGTTCAGTATGGAGGACTGAATCGGCCCAGCGATTTGCAGAATGGTCCCCCAAAACCTGCATCCGAGTTCACAATCAAAGGAGGGGAGAAAGTGAACATACAAATAGAAGGAATTGAGGCTGGTGCAACTATCACATGGGACATTGTGGTTGGAGGGTGGGACTTGGAATACAGTGCTGAGTTTGTGCCAAATGCTGAAGGAAGCTACACCATAGCAGTTGAAAAGCCAAGGAAGATGGGGCCATCAGAAGAAGCAATCAACAACTCATTCACATCAAAAGAATCTGGCAAAATGGTACTCTCAGTTGATAACACTGCTTCAAGGAAGAAAAAGGTTGCTGCATATCGCTATGTTGTCCGCAAAAGCAGCACCGTTTGAGATGTGGCCATTAAATAGTTTCTAGGAACTTTTTATTAATATCTCGCTTGTAATGTTACTTTTTCTACCCTTTTTTGGTTAATTTTTAGAGGGTCTCGTTTATGCTTCTGAACTCTTGAAAACCTGTTCAAAGGTATTAACTAGTAGTGGTACTAATGTGATGTAAAAAGAGAGAAATGGTGGTGGTAGAATATGGCTTGGTATAGAAGGAAAGCAATTAAGTTTGCTTATATAGCATACCAAATTACTGTTGTCGTCCTTTTAGATCGTGGTGACTCTTGCAAGTGTGAGTGTGTGACCATTGATTGTGTTGTCCTTTAGGACACGTGGATATTGTGTATGTTGCAATCTAGAGGCATCATCACTTTGTGAAGGAGCAATCTATGGTTTATAATTTGAGCTTTCTGTTTTTGTGCGGGGTTTGATTAATGGTTGAAGGAAAGTACTTGAGAAGTGTCCACGTAAAAGAAAGGGAAATTCTGGTGTTGGATATTGCCAAGGACTATATAGTGTAAGAAGGGGTTTGGCTACTTTGTATAGATAGATAGATTTTATTGTAATCAATGTATGGACCAAGAGGATGACGAGAGTTCCAAAGAAAGAAGAGGGAAGAGGGTCACGGGCAGTAACTGATAACGTGTTCACTGGGCTAAGATTAGGTACTGGAGCCTCTTTCCTTGCTTTATAATGTTTCAAGAGTGATGTCAATTCTGGTTTGGTGAACCATTTACCTTTGGTTTTTAAATTCATTCTCTTTCTACCTCCTTTACCTTTTATGCTTATATTTACGAGATTCTAACTCAGATAAGAATA 2130 0.4197 MMDTTSSPLSLQNQKASFQDLPEASPKPYKKGFVATLMGGASTPSFKEDNYFVSLLRSSERKALQELKDKLKASFDESPSDASMWGIPLLGGDEKADVILLKFLRARDFRVGDALHMLIKCLAWRKDFGADTILEEDLGFKELEGVIAYMQGYDKEGHPVCYNAYGLFKDKEMYERVFGDEEKLKKFLRWRVQVLERGIKVLHFKPGGVNSLIQVTDLKDMPKRELRVASNHILSLFQDNYPEMVARKVYVVLLFSSNQEHVDVFINVPWYFSMLYSMFSPFLTQRTKSKFVISKEGNAAETLYKFIRPEDIPVQYGGLNRPSDLQNGPPKPASEFTIKGGEKVNIQIEGIEAGATITWDIVVGGWDLEYSAEFVPNAEGSYTIAVEKPRKMGPSEEAINNSFTSKESGKMVLSVDNTASRKKKVAAYRYVVRKSSTV 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00458 438 SUPERFAMILY CRAL/TRIO N-terminal domain 58 137 IPR036273 -
Pste6g00458 438 MobiDBLite consensus disorder prediction 1 20 - -
Pste6g00458 438 SMART sec14_4 142 321 IPR001251 -
Pste6g00458 438 SMART CRAL_TRIO_N_2 96 121 IPR011074 -
Pste6g00458 438 MobiDBLite consensus disorder prediction 1 27 - -
Pste6g00458 438 ProSiteProfiles GOLD domain profile. 300 434 IPR009038 -
Pste6g00458 438 SUPERFAMILY CRAL/TRIO domain 141 321 IPR036865 -
Pste6g00458 438 CDD SEC14 140 319 IPR001251 -
Pste6g00458 438 Pfam CRAL/TRIO domain 264 318 IPR001251 -
Pste6g00458 438 Pfam CRAL/TRIO domain 144 250 IPR001251 -
Pste6g00458 438 Pfam CRAL/TRIO, N-terminal domain 63 120 IPR011074 -
Pste6g00458 438 Gene3D - 129 329 IPR036865 -
Pste6g00458 438 Gene3D GOLD domain 330 432 - -
Pste6g00458 438 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 135 324 IPR001251 -
Pste6g00458 438 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 335 433 IPR036598 -
Pste6g00458 438 Gene3D - 54 127 - -
Pste6g00458 438 PANTHER PATELLIN-1 42 435 IPR044834 GO:0008289
Pste6g00458 438 FunFam SEC14 cytosolic factor family protein 52 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00458 Pste-Chr6 1714689 1717551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g00458 100 290 Acyl Lipid Metabolism Gene Families AT5G47730 29.064 4.25e-11 62.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01999 5 12688739 12690780 Pste6g00458 6 1714689 1717551 PCT