Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g00408 ATGTTGCCAAGAACAAGTCTTGCAGATGGTTTTCGGGTAAGTTCCTCAAGTACACCTAGCAATTCCAGTGGTGGATCTGAACCAGAAGATCTAGATACATTTCGTGATATCTATATATGGGGAGAGGTTCTCGCAAGTGGGGCTTCACCTGATGGGGTTGGAACTCAAATTCCTTCTTCGATAAATGTATTGACTCCTAAGCCTTTAGAAACCAATATTATTCTGGATTTTTGTCAGATTGCAACAGGTGCACACCATATTGCTACAGTAACTAAGCAAGGAAACATTTTTACCTGGGGAAAAGAATCAGGGGGAAGGCTTGGTCATGGAATTGATAAAGATTTTAGCTCTCCTCGTCTAGTTGAGTTTATAGCAGGTACTGATTTTGACTTTGTTGCTTGTGGAGAACATCATACAGGTGCTATTTCTAAATCTTTTGAACTTTATATGTGGGGTGATGGAACACATAATATTGGACTTCTTGGAAATGGTTCTGAGGCTAGCCATTGGAAACCTAAAATCGTCAATGGCCCTTTGGAAGGACTTCAAGTTGTATCTGTTGCATGTGGCACATGGCATTCAGCATTGGCAACCTCAGATGGAAAACTTTTTACATTTGGTGATGGGGCATTTGGTGTATTAGGCCATGGAGATCACGAGAGTGTATGCTATCCAAAAGAGGTACAACTATTAAGTGGACTAAAGACTATAAAGGTTGCATGTGGAGTTTGGCATACAGCAGCTATTGTAGAGGTTGAATTTCAATCTAATTCAAATAATCCACCGTGGAAGCTTTTCACATGGGGTGATGGAGACAAACATCGTTTGGGTCATGGAAACAAGGACACATACCTTCAACCCACCCGAGTGTCACCACTTATGGAATATAATTTCCACCAAGTAGCATGTGGGCACACAATAACAGTTGCTCTAACAACATCTGGTCATGTCTTTACCATGGGAGGCATAGAACATGGTCAATTAGGAAATCCTATGTCAGCTGGAAGACAACCTACTTTAGTCCAAGATAAGTTGCTTGGTGAGTTTGTGGTGGAAATATCATGTGGAGCACATCATGTTGCTATCTTGACAACAAAAGGAGAACTGTATACATGGGGAATGGGTGCCAATGGGAGATTGGGACATGGAGATGTGGAAGATAAGAAATCTCCTACATTGGTCGTAGCCTTAAAAGATAGAAATGTAAAAAATATCTCATGTGGTTCTAATTTTACATCATGTATATGCATCCATAAACGAGTCTCTGAAACCGATCAATCTATTTGCTCTAGTTGTCGACAAGCATTTGGTCTGACAAGGAAAAAACACAATTGTAACAATTGTGGATTAGCCTTTTGTCATGCTTGTAGTTCTAAAAAGGCATTGAAAACATCATTGTCTCCAACACCAGAAAAGCCTCATCGTGTGTGTGATAATTGTTATGCTAAGCTTAAAGTTATTGAAGATAATGATACTTTCAAGTTAGATAAAAAATCTGCTTCCATAATTGGAAAGGACAAATTAGGCCAAGGAGCAATAAAGTCTACAAGAATTCTCTTGTCTCCCATCATTGAACCAATAAAATACCTTGAAGTAAATAGTAGCAATCCTGAAAGAAACAGAGATTTTACTTCTTTCGTACGAGCTTCTCAAGTTCCATCTCTTTTACAATTGAAAGATATTTCATTTCCACATTCTCTTAGCTCTCCTCAAAGTGTTTTAAATCCTACTTTACCTCCTAATTCATTGCAAACCGCAACACCACATACCAATTCAGTGCCCATATTCACAAAGACAAAAAGGCAAAGCCCTTCACGTCTTGTCAGCCCTAGATATTTTGGAACTCATAACGACAGTTTAAGAAAGACAAATGATCTTTTGAATCAAGAAGTTTCAAAGTTACAAAAACAAGTAATTTAA 1920 0.3859 MLPRTSLADGFRVSSSSTPSNSSGGSEPEDLDTFRDIYIWGEVLASGASPDGVGTQIPSSINVLTPKPLETNIILDFCQIATGAHHIATVTKQGNIFTWGKESGGRLGHGIDKDFSSPRLVEFIAGTDFDFVACGEHHTGAISKSFELYMWGDGTHNIGLLGNGSEASHWKPKIVNGPLEGLQVVSVACGTWHSALATSDGKLFTFGDGAFGVLGHGDHESVCYPKEVQLLSGLKTIKVACGVWHTAAIVEVEFQSNSNNPPWKLFTWGDGDKHRLGHGNKDTYLQPTRVSPLMEYNFHQVACGHTITVALTTSGHVFTMGGIEHGQLGNPMSAGRQPTLVQDKLLGEFVVEISCGAHHVAILTTKGELYTWGMGANGRLGHGDVEDKKSPTLVVALKDRNVKNISCGSNFTSCICIHKRVSETDQSICSSCRQAFGLTRKKHNCNNCGLAFCHACSSKKALKTSLSPTPEKPHRVCDNCYAKLKVIEDNDTFKLDKKSASIIGKDKLGQGAIKSTRILLSPIIEPIKYLEVNSSNPERNRDFTSFVRASQVPSLLQLKDISFPHSLSSPQSVLNPTLPPNSLQTATPHTNSVPIFTKTKRQSPSRLVSPRYFGTHNDSLRKTNDLLNQEVSKLQKQVI 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g00408 639 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 367 418 IPR000408 -
Pste6g00408 639 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 146 200 IPR000408 -
Pste6g00408 639 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 431 490 IPR013083 -
Pste6g00408 639 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 19 638 - -
Pste6g00408 639 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 423 485 IPR017455 -
Pste6g00408 639 MobiDBLite consensus disorder prediction 9 28 - -
Pste6g00408 639 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 94 145 IPR000408 -
Pste6g00408 639 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 80 90 IPR000408 -
Pste6g00408 639 FunFam PH, RCC1 and FYVE domains-containing protein 1 6 254 - -
Pste6g00408 639 SUPERFAMILY RCC1/BLIP-II 37 419 IPR009091 -
Pste6g00408 639 Coils Coil 617 637 - -
Pste6g00408 639 SMART fyve_4 417 486 IPR000306 GO:0046872
Pste6g00408 639 MobiDBLite consensus disorder prediction 1 29 - -
Pste6g00408 639 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 239 249 IPR000408 -
Pste6g00408 639 Pfam Regulator of chromosome condensation (RCC1) repeat 148 196 IPR000408 -
Pste6g00408 639 Pfam Regulator of chromosome condensation (RCC1) repeat 314 362 IPR000408 -
Pste6g00408 639 Pfam Regulator of chromosome condensation (RCC1) repeat 200 249 IPR000408 -
Pste6g00408 639 Pfam Regulator of chromosome condensation (RCC1) repeat 94 142 IPR000408 -
Pste6g00408 639 Pfam Regulator of chromosome condensation (RCC1) repeat 366 415 IPR000408 -
Pste6g00408 639 Pfam Regulator of chromosome condensation (RCC1) repeat 265 311 IPR000408 -
Pste6g00408 639 SUPERFAMILY FYVE/PHD zinc finger 421 489 IPR011011 -
Pste6g00408 639 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 315 366 IPR000408 -
Pste6g00408 639 Gene3D - 13 258 IPR009091 -
Pste6g00408 639 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 263 314 IPR000408 -
Pste6g00408 639 Pfam FYVE zinc finger 422 484 IPR000306 GO:0046872
Pste6g00408 639 Gene3D - 259 430 IPR009091 -
Pste6g00408 639 PRINTS Chromosome condensation regulator RCC1 signature 146 162 IPR000408 -
Pste6g00408 639 PRINTS Chromosome condensation regulator RCC1 signature 187 203 IPR000408 -
Pste6g00408 639 PRINTS Chromosome condensation regulator RCC1 signature 304 322 IPR000408 -
Pste6g00408 639 PRINTS Chromosome condensation regulator RCC1 signature 203 217 IPR000408 -
Pste6g00408 639 PRINTS Chromosome condensation regulator RCC1 signature 362 383 IPR000408 -
Pste6g00408 639 PRINTS Chromosome condensation regulator RCC1 signature 96 112 IPR000408 -
Pste6g00408 639 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 201 252 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g00408 Pste-Chr6 1412390 1414309 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01927 5 12216677 12222147 Pste6g00408 6 1412390 1414309 PCT