Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02997 CATCCATGACTTGCTGTTGGTTGCCACAGTGATTTGGACTTGAAAGAGCCCATCTTTTCATGTCTATTGATATTGATTGTTGATACATCACTTGGCTTGTTGATGTCCTCTTTGAATCAATCTCTCTTTCCAAACGACTCTTGGTCCTCGACTGTTACTTCATCTGCGTCAACCACTGTGTTCAACCTATGCTTTTTAAAGCTTCAAGCTTCAACCTTACCCAGCGCACATTCACACCATCATACAAAAATGACTTCTTCTCTTCCTCAAGTTGCCAAGAACCAAGCAATGTGGCTGCATCCAAAGGTTTTGGGTTTTAATCCTTCTGAAAGATGGGGACACTCCGCTTGCTTCTCCAAGGGGCTCATGTATGTCTTTGGGGGTTGCTGTGGTGGATTGCATTACTGCGATGTCCTTACTTTGGACCTTAACAAAATGGTTTGGAGCAAGCTTACTACCACGGGTGAAAAGCCAGGGCCTAGAGATAGTCATAGTGCTGTTCTAGTGGGGCATAAAATGATAGTGTTTGGGGGCACAAATGGCTTCAAGAAGGTGAATCATATTCATATACTTGATCTTGTTAGCAAGGAGTGGATTCGACCCGAGTGTAAAGGGACTCCTCCTTCTCCACGTGAAAGCCATACTGCCACACTTGTTGGTGACGAAAGAATAGTGATATTTGGGGGTAGTGGAGAAGGTCGTGCTAACTATTTGAACGATTTGCATATTCTTGATCTTCGAACCATGTGTTGGACTTCCCCTGAGTTGAAAGGTGATTTTCCTGTCCCTAGGGACAGTCATAGTACCCTTGCAATTGGAAACAAGCTTATTGTGTATGGTGGAGACTCTGGTGAGCAGTATCATGGCAATGTTCACATGCTTGATATGGCAACAACGACTTGGTCTAGATTGACAATTCATGGTTCTCCACCAGGAGTCAGAGCAGGTCATGCGGCAGTGAACATTGGAACAAAGGCAACTTTGCATGATGTACAGGTTTATATCATTGGAGGAGTTGGAGATAAACATTACTATAATGATGTTTGGATCTTTGATATCTGCAATTCTTGGTGGACTCAACTTGATGTACATTTTCCTCGTCCGCAAGGGCGATTTTCTCATACAGCTGTTGCTGCAGGCATGGATATTGCGATATATGGCGGGTGTGGGGAAGATGAACGCCCTCTCAATGAATTGTTAGTGTTGCAGCTTGGAGCAGAGCATCCAAATGGACGTTACTGCATTCCCATGTGCAAGCCTTTTGGAGCTAATTGGAATCAAGAAAAGAAGATTATCCCCGTAGAAGCAGATACCAACTCGGTACAGAAGTTCATCTTTTGGAAAAGGAGTAGTTCTCGACAGAAGAGAAGGAGAATTGCTGCTGCAAAGGTGTGGGATGTCGAATCAGAACAAGAAGAAAAATTTCTTTCATTGTCCCTTCATTCATCTCCATATCAATCCGATCAGGAACAGACCACAAGTCAGAAAACAAATGCTCTATTTCCGAACACTTGCCAACGCGACAATGACTCAAATTATAAGAGAACTTTGAAGAAAATCCCATTTAAAACTCCACAAGATCTTCATTTCCTACAACATCAACTCAAACAAGAACAATTTCTTGATGTTCAAGAGGACAGAAAAAAAGCTCAGCATCAGGCTGCGGAGCAGAAATCCTTGATGAGAGGACCCATTCAACATCTGGGAGCAGGAGTTGTCTCAAAGGTGGCCAGTGTCAGACCAAACTGTTCTCTAACAAGTTCTCTTCCTTCTTCCTCTCAAGCATTTTTGAACTCCAATCATGTGGGTAATTTAAGGGCTTCCCAACAAGCAACTATTTGTTTGCATGCAGAGCCATGCCATAATTCGCTGCATACCCCAGTGGCTTTAGCATTTCCAATCATGCGAGGCACTTCAAATGTTGTTTCCAAAGAGCATAAAATCAGGAGTGACCTTCAAGGCTTGGCTTTAACACTTGGAGGACCTGCCAGTGGAAATCCTCAGGTATAATATTTTGAGGAGGCAAATGAAACAAGGTTGATGTAAATTTCGGACATATCCCACGTACTTGAGTTGTTATGGTTTTCCTTTCCTGCATGAATCAATCGTTATCTGTATAATATTTAATTTTCGGTTTACAGTGTAATCCTGTCCTCTTCC 2160 0.4278 MSSLNQSLFPNDSWSSTVTSSASTTVFNLCFLKLQASTLPSAHSHHHTKMTSSLPQVAKNQAMWLHPKVLGFNPSERWGHSACFSKGLMYVFGGCCGGLHYCDVLTLDLNKMVWSKLTTTGEKPGPRDSHSAVLVGHKMIVFGGTNGFKKVNHIHILDLVSKEWIRPECKGTPPSPRESHTATLVGDERIVIFGGSGEGRANYLNDLHILDLRTMCWTSPELKGDFPVPRDSHSTLAIGNKLIVYGGDSGEQYHGNVHMLDMATTTWSRLTIHGSPPGVRAGHAAVNIGTKATLHDVQVYIIGGVGDKHYYNDVWIFDICNSWWTQLDVHFPRPQGRFSHTAVAAGMDIAIYGGCGEDERPLNELLVLQLGAEHPNGRYCIPMCKPFGANWNQEKKIIPVEADTNSVQKFIFWKRSSSRQKRRRIAAAKVWDVESEQEEKFLSLSLHSSPYQSDQEQTTSQKTNALFPNTCQRDNDSNYKRTLKKIPFKTPQDLHFLQHQLKQEQFLDVQEDRKKAQHQAAEQKSLMRGPIQHLGAGVVSKVASVRPNCSLTSSLPSSSQAFLNSNHVGNLRASQQATICLHAEPCHNSLHTPVALAFPIMRGTSNVVSKEHKIRSDLQGLALTLGGPASGNPQV 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02997 635 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 63 582 - -
Pste5g02997 635 Pfam Galactose oxidase, central domain 88 134 - -
Pste5g02997 635 Pfam Galactose oxidase, central domain 188 238 - -
Pste5g02997 635 Pfam Galactose oxidase, central domain 136 184 - -
Pste5g02997 635 Pfam Galactose oxidase, central domain 239 286 - -
Pste5g02997 635 Gene3D - 222 389 IPR015915 GO:0005515
Pste5g02997 635 Gene3D - 44 221 IPR015915 GO:0005515
Pste5g02997 635 SUPERFAMILY Kelch motif 121 370 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02997 Pste-Chr5 22903947 22908386 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02997 64 386 Acyl Lipid Metabolism Gene Families AT3G05420 29.377 1.86e-33 134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02997 5 22903947 22908386 Pste5g02997 5 22903947 22908386 ECH
Pste5g02997 5 22903947 22908386 Pste4g01282 4 9427062 9430951 PCT