Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01282 ATGGGGTCTCTTGTTGCTGAAACAGCCAAGAAGAAAGCAATGTGGTTGTATCCAAAGGTTTTGGGTTTTAATCCTTCTGAAAGATGGGGGCACTCTTCTTGCTTCTCTGGGGGGCTTATGTATGTCTTTGGGGGCTGTTGTGGGGGGGTACATTTCGGCGATGTTCTGTGTTTGGACCTTGACAAAATGGCTTGGAGCAAGCTTGTGACCACGGGTGAAAAGCCAGGTCCTAGAGATAGCCATAGTACTGTTCTTGTAGGGCAGAAAATGATAGTGTTCGGTGGCACAAATGGGTTGAAGAAGGTGAATGACACACATATATTGGACCTTGCTACCAAAGAGTGGATTCGTCCTAAATGTCAAGGGACTCCTCCTTCTCCACGGGAAAGTCACACTGCCACTCTGGTTGGTGACGAAAGACTAGTGATTTTTGGTGGTAGTGGAGAAGGTGACGCAAACTATTTAAATGATTTGCATGTTCTAGACCTTCGAACAATGAGGTGGACTTCTCCTGCTGTCAAAGGTGATCTGCCTGTCCCTAGGGATAGTCACAGCACTCTTGCAATTGGGAACAAGCTTATTGTGTATGGTGGAGACTGTGGTGATCAGTATCAGGGCGATGTTAATGTGCTTGACGTGGATACAATGACTTGGTCAAGGTTGAAAATTCAAGGCTCTTCCCCAGGAGTCAGGGCGGGTCATGCAGCTGTGAGCGTTGGAACCAAGGCAAGAGATAAACGTTACTATAATGACATATGGGTCTTTGATGTCTGCACCTGTTCATGGACTCAGCTTGATGTTCGTGGTCAACCGCCACAGGGGCGATTTTCTCACACAGCTGTTATTGCAGACATGGATATTGCCATATATGGCGGCAGCTGTGGGGAAGATGAACGTCCTTTGAACGAATTGTTAGTGTTGCAGCTTGGAGCAGAGCATCCAAATGGACGTTACAACATTTCCATGTGCAAAGTCTTTGGAACTTATTGGAATCAAGAAAAGAGGACCATAACTGGTGGAGCAGATACCAACTCGACAACTCCACGCACGGGGAATAATATGGAAGTCTTAGGTAAATGGGGTTCTGAAGGGAATAATATGGAAGTCTTAGGCACTTCACAACAAAAGAGGAGGAGAATTGCTGTTGCAAAGGTGTGGGATGTGGAATCAGAGCAAGAAGAACATTCTCTTACACTGTCCCAGCATTCATCTCCATCTCAATCTGATCAAGAACAAACCCCAGATCAAAAAGCAAATGTTTCTGTCATGGATTCTCAGCGGTATCATTGGTTCAAACAACATATCAATAAAAGTCCAAGCTATTGCCTGCTTGACAATATCCCAAGTAATAACACAGTTTTGAAGAATATCATGCATAAAAGTTTACATCCATTGGAAAATCAACCAAAGCAAGAAAAGTATCTTCATGTTGATGAGTACAGAAAAGGAGCTCCACATAGTCAACACCTGATTGGTGCCGAAGTTAGGGGGAAAGTTGATGGAGCCTTTGATTCAGGTTTACTCATGACTGCAGCAGTGAATGGAAGAGTTTTCAGAGGAGTCTTATTTGCACCCGGAACAGAAGTATTGTCGACATGTGTTGAGTCAAACTGTTCACTTCCCTCCACTCAACAATCTATGAACTCAAATAATGTGAAGGAATCCCAGCAAGTAACTACTTATTCGCGTGCAGAGACATGCCATCAAGCATCACCAATGATGAGAGGCACTGCTTCTGCATCTTTAGCCAGCGAGCATAAAATGAGGAATGACCTTCAAGGGTTGGTTTTGACACTTGGAGGGCCTGCCAGTGACAACCATGCTAGATCCTAA 1833 0.4463 MGSLVAETAKKKAMWLYPKVLGFNPSERWGHSSCFSGGLMYVFGGCCGGVHFGDVLCLDLDKMAWSKLVTTGEKPGPRDSHSTVLVGQKMIVFGGTNGLKKVNDTHILDLATKEWIRPKCQGTPPSPRESHTATLVGDERLVIFGGSGEGDANYLNDLHVLDLRTMRWTSPAVKGDLPVPRDSHSTLAIGNKLIVYGGDCGDQYQGDVNVLDVDTMTWSRLKIQGSSPGVRAGHAAVSVGTKARDKRYYNDIWVFDVCTCSWTQLDVRGQPPQGRFSHTAVIADMDIAIYGGSCGEDERPLNELLVLQLGAEHPNGRYNISMCKVFGTYWNQEKRTITGGADTNSTTPRTGNNMEVLGKWGSEGNNMEVLGTSQQKRRRIAVAKVWDVESEQEEHSLTLSQHSSPSQSDQEQTPDQKANVSVMDSQRYHWFKQHINKSPSYCLLDNIPSNNTVLKNIMHKSLHPLENQPKQEKYLHVDEYRKGAPHSQHLIGAEVRGKVDGAFDSGLLMTAAVNGRVFRGVLFAPGTEVLSTCVESNCSLPSTQQSMNSNNVKESQQVTTYSRAETCHQASPMMRGTASASLASEHKMRNDLQGLVLTLGGPASDNHARS 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01282 610 Gene3D - 10 241 IPR015915 GO:0005515
Pste4g01282 610 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 14 557 - -
Pste4g01282 610 SUPERFAMILY Kelch motif 20 242 IPR015915 GO:0005515
Pste4g01282 610 Pfam Galactose oxidase, central domain 139 189 - -
Pste4g01282 610 Pfam Galactose oxidase, central domain 87 135 - -
Pste4g01282 610 Pfam Galactose oxidase, central domain 190 238 - -
Pste4g01282 610 Pfam Galactose oxidase, central domain 37 85 - -
Pste4g01282 610 MobiDBLite consensus disorder prediction 397 420 - -
Pste4g01282 610 Gene3D - 242 432 IPR015915 GO:0005515
Pste4g01282 610 SUPERFAMILY Kelch motif 246 325 IPR015915 GO:0005515
Pste4g01282 610 MobiDBLite consensus disorder prediction 393 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01282 Pste-Chr4 9427062 9430951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01282 167 309 Acyl Lipid Metabolism Gene Families AT3G05420 30.000 8.70e-16 79.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01282 4 9427062 9430951 Pste4g01282 4 9427062 9430951 ECH
Pste5g02997 5 22903947 22908386 Pste4g01282 4 9427062 9430951 PCT