Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02805 ATGGTTGTGGCTTCTGGAAGATCAAAGGAGAAAAGAAGAAAGGGAATGGAAATTCCAACGATAGACCTATCAATGGAAAGGGGAGAGTTGTCGGAAAGAGTGGTGAAAGCGTGCGAAGAATACGGTTTCTTCAGGGTAGTAAGGCACAATGTGGGGAAGGAGGTAATTAGAAGAATGGAAGAGGAGAGTGAAGAGTTTTTCGCGAAAAAAACAAAGGAGAAGCGGAGAGCTGGGCCAGCAAATCCATTCGGTTATGGGCTTAGCAAAATCGGGCCCAACGGTGATATGGGAGACCTTGAGTATCTTCTGCTTCAAGCTAATCCACTCTCCATCTCCCACACATCCAAAACCATCGCTAATCACTCCACCAACTTCAGTTGTGTTGTGAATGATTATGTAGAAGCAGTGAAAGAAGTAACATGCGAGATTCTAGATTTGGTGGTTGAAGGTTTGGGAATTCCAGAAAAATGTGCACTAAGCAAGGTCATAAGAGATGTCCATAGTGATTGTGTGCTTAGGATCAATCACTACCCTCCATTGAAGCAGAAGAACAGCATTGGTTTTGGGGCGCATTCTGACCCTCAGATCTTGACCATCATGCGTTCTAATGACGTGGGTGGCCTTCAAATTTACACTCGTCAAGGCTTCTGGATTCCTGTACCTCCCGACCCCAATCAATTCTTTGTCATGGTTGGCGATGTCTTTCAGGTTTTGACAAATGGGAAGTTCATGAGCGTGAGGCACAGGGCATTAACGAACACAATGGAGGCGAGGATGTCAATGATGTACTTTGCAGCACCACCGCTTGATTGGTGGATCAGAGCTCTACCCATGATGGTGTCACCACCACAGAATCCAAGTCTATATAAGCCATTCACATGGGCCCAGTACAAGCAAGCAACATATTCTTTACGCCTCGGAGATTCCAGACTTGACCTCTTCAAGGCCCAGCTTCGTACCCATCATGTCTCTGCTTCTCCATCACATTTTTAA 993 0.4572 MVVASGRSKEKRRKGMEIPTIDLSMERGELSERVVKACEEYGFFRVVRHNVGKEVIRRMEEESEEFFAKKTKEKRRAGPANPFGYGLSKIGPNGDMGDLEYLLLQANPLSISHTSKTIANHSTNFSCVVNDYVEAVKEVTCEILDLVVEGLGIPEKCALSKVIRDVHSDCVLRINHYPPLKQKNSIGFGAHSDPQILTIMRSNDVGGLQIYTRQGFWIPVPPDPNQFFVMVGDVFQVLTNGKFMSVRHRALTNTMEARMSMMYFAAPPLDWWIRALPMMVSPPQNPSLYKPFTWAQYKQATYSLRLGDSRLDLFKAQLRTHHVSASPSHF 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02805 330 Pfam 2OG-Fe(II) oxygenase superfamily 169 266 IPR044861 -
Pste5g02805 330 FunFam Gibberellin 2-beta-dioxygenase 2 3 305 - -
Pste5g02805 330 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 18 300 - -
Pste5g02805 330 SUPERFAMILY Clavaminate synthase-like 14 308 - -
Pste5g02805 330 Gene3D - 2 305 IPR027443 -
Pste5g02805 330 Pfam non-haem dioxygenase in morphine synthesis N-terminal 18 89 IPR026992 -
Pste5g02805 330 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 167 267 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02805 Pste-Chr5 20631394 20634036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02805 9 315 Glycosyltransferase AT5G59530 26.935 1.21e-26 106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02805 5 20631394 20634036 Pste5g02805 5 20631394 20634036 ECH
Pste5g02805 5 20631394 20634036 Pste4g01499 4 11160598 11164192 PCT