Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01499 ATGGTTGCCCCTAGTCCAACTTCCATGATGGTAGGAAGCAAGAAAACAAAGGGTATGGGAGTTCCAACAATCGACCTTTCCATGGAAAGGTCGAAGTTGTCGGAGTTAGTAGTGAAAGCATGTGAGGAATATGGTTTCTTCAAGGTGGTGAACCACAGTGTGCCAAAGGAGGTGATTACAAGATTGGAAGAGGAGGGAATAAAGTTTTTCTCCAAAGCCTCCTCAGAGAAGCGCCAAGCTGGCCCTGCCAATCCTTTTGGCTATGGCTGCAGAAACATTGGCCCCAATGGCGATATGGGTCACCTTGAGTATCTCCTCCTTCATACCAATCCTCTTTCCGTTTCCGAGAGATCCAAAACCATAGCAAACGACCCTACCAAGTTCAGCTGTGCGGTGAATGATTATATAGAAGCCGTTAAAGAACTGACATGTGAGGTTCTTGATCTGGTGGCGGAAGGTCTATGGGTCCAAGACAAGTTCTCACTCAGCAAGCTCATCAGAGACGTCCATAGTGACTCACTCCTCAGGATCAATCAATACCCTCCCGTGAGCCTAAAGGTCACCAAGAATTGGGACACGTCCAAACTTGAGGCACATCAACTCCAGAGTGAAAATAATAATAATAGTAACAACATTGGGTTTGGAGAACATTCTGACCCTCAGATCTTGACCATCATGCGATCCAACGACGTGGATGGCCTTCAGATTTCCACCCACGATGGGTTGTGGATCCCTGTCCCCCCTGACCCCAATGAATTCTTCGTTATGGTTGGTGATGCCCTGCAGGTTTTGACAAATGGAAGGTTTGTGAGCGTGAGACACAGAGTATTGACCAACACAACAAAGGCCAGAATGTCAATGATGTACTTTGCAGCACCACCGCTGAATTGGTGGATCAGTCCACTGCCAAAGATGGTGACACCCCACAATCCAAGTCTCTTTAAGCCCTTCACATGGGCCCAATACAAGCAAGCTGTATACTCTCTCAGATTGGGAGACGCTCGCCTTGATCTCTTCAGGATCCAACGACAACAAGATACCCTTCTCGCAACTGGTTCTCCCTGA 1065 0.477 MVAPSPTSMMVGSKKTKGMGVPTIDLSMERSKLSELVVKACEEYGFFKVVNHSVPKEVITRLEEEGIKFFSKASSEKRQAGPANPFGYGCRNIGPNGDMGHLEYLLLHTNPLSVSERSKTIANDPTKFSCAVNDYIEAVKELTCEVLDLVAEGLWVQDKFSLSKLIRDVHSDSLLRINQYPPVSLKVTKNWDTSKLEAHQLQSENNNNSNNIGFGEHSDPQILTIMRSNDVDGLQISTHDGLWIPVPPDPNEFFVMVGDALQVLTNGRFVSVRHRVLTNTTKARMSMMYFAAPPLNWWISPLPKMVTPHNPSLFKPFTWAQYKQAVYSLRLGDARLDLFRIQRQQDTLLATGSP 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01499 354 Pfam 2OG-Fe(II) oxygenase superfamily 176 292 IPR044861 -
Pste4g01499 354 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 170 293 IPR005123 -
Pste4g01499 354 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 21 324 - -
Pste4g01499 354 FunFam Gibberellin 2-beta-dioxygenase 2 4 330 - -
Pste4g01499 354 SUPERFAMILY Clavaminate synthase-like 10 333 - -
Pste4g01499 354 PRINTS Isopenicillin N synthase signature 217 238 - -
Pste4g01499 354 PRINTS Isopenicillin N synthase signature 37 54 - -
Pste4g01499 354 PRINTS Isopenicillin N synthase signature 253 279 - -
Pste4g01499 354 Gene3D - 2 329 IPR027443 -
Pste4g01499 354 Pfam non-haem dioxygenase in morphine synthesis N-terminal 21 85 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01499 Pste-Chr4 11160598 11164192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01499 14 341 Glycosyltransferase AT5G59530 25.588 4.31e-24 99.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01499 4 11160598 11164192 Pste4g01499 4 11160598 11164192 ECH
Pste5g02805 5 20631394 20634036 Pste4g01499 4 11160598 11164192 PCT