Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02770 GGAGTGAACAGTGTGATATGCAGATATAATATTAGTATATAAAGTTGGGAAGAAGAGGAGGTGAGAGCAACATTTATTCTGGTTGGAGGTTACAGAAAATGTCAAGGAGCATAACAGCGGTAATTGGGTTGGCGATGGTGTATTTGGTGGGGCACACGTGCGAGGGAGGAGAGGCATTCGCGTGCGACCCAAAAGATGGGCGAACGAAGAGCATGGGATTTTGCAAAGAGTCAGAGGGGATAGCGGAGAGGGTGAAGGAGGTGATAGGAAGGTTGACGATGGAAGAGAAGGTGAGAATGCTGGTGAACAATGCGGCGGGGGTTCCAAGGCTGGGGATAAAAGGATACGAGTGGTGGTCGGAGGGACTCCATGGGGTTTCAAATGTCGGTCCCGGAGTCAACTTCAATTCCCAGTTTCCCGCCGCTACTAGCTTCCCTCAGGTCATCACCACCGCTGCTTCCTTCAATGCTTCTCTCTGGGAGGCCATCGGACAGGTTGTGTCGGACGAGGCAAGGGCAATGTACAACGGTGGAACAGCAGGGCTCACGTATTGGAGCCCAAATGTAAACATTTTCAGGGACCCTAGGTGGGGCCGTGGACAGGAAACTCCCGGTGAGGACCCTGTGCTAGCCGGTACATATGCCGCTAGTTACGTCAGGGGCTTACAGGGAACCGACGCTAACCGGTTGAAGGTTGCCGCTTGTTGCAAACACTTCACCGCTTATGATCTCGACAATTGGAACGGCATGGATCGCTTCCACTTTAATGCACAGAGAAGTAATTGTTTTGGGGTCATGGATACCTTTAATTTGTTGATAAGCTTGGATCAGCACGGGCCTTACGTGAGTGAAATGTATGAGCTTAATATGCAGGTGAGTAAGCAGGACATAGAAGATACATTCAACGTGCCATTCAGGATGTGTGTGAGCGAAGGGAAAGTAGCAAGTGTGATGTGTTCTTACAATCAAGTCAATGGGGTCCCTACCTGTGCGGACCCTAACCTCCTAAAGAAAACAGTTCGTTTGGATTTAAACTGTGGGCCTTTCCTAGCTGTGCACACGCAGAATGCGATCAAAAAAGGATTGCTAAGCGAGGCTGACGTGAATGGAGCTCTGGTGAATACACTGACAGTCCAAATGAGGTTAGGAATGTTCGATGGAGAGCCATCGGCCCATCCATATGGCAACTTGGGCCCAAAAGATGTGTGCAAACCGGCCCATCAAGAGCTCGCTCTTGAAGCTGCCAGACAAGGAATCGTGCTCCTTAAGAACACTGGTCCTGTTTTGCCCCTCTCCACACAACGTGTTGCTTGTGGGTATACCAGCCCCTTACAAGGAATAGGAAACTATGCGCGGACTATTCATGAGTTTGGTTGTGAAAATGTAGCTTGTAAAGATGAGAAGCATTTTGGGGCTGCTATTAATGCGGCCCGTGAAGCAGATGCAACGGTTTTAGTTATGGGGTTGGATCAATCCATTGAAGCCGAAACCGTGGACAGGAGGGGGTTGATTTTGCCTGGTCGTCAACAAGACCTTGTTTGGAAAGTGGCAGCTGCCTCAAAGGGACCAACAATTTTGGTCTTAATGTGTGGTGGTCCTGTGGATATAAGTTTTGCAAAAAATAACCCGGCAATTGTTGGCATCCTGTGGGCTGGTTATCCGGGCCAAGCTGGTGGTGCTGCCATTGCAGATATTCTGTTTGGAACAGCTAGCCCAGGGGGGAAGCTGCCAGTGACATGGTACCCAGAAGAATACATAAGAAAGTTGGCAATGACAAATATGGCAATGCGAGGAAGTAAATCAGCTGGGTACCCAGGAAGAACGTATCGGTTCTACAATGGTCCGGTGGTGTATCCATTTGGACACGGCTTAACATACACACACTTTGTTCATACACTAGCAAGTGCACCCACAGTGGTGTCGGTTCCCTTGAATGGACACCGGCGTGGCAACCTCACCAGTTTGTCAAACACTAACAGGGCAATCAGAGTGACGCATGCGCGATGTGACAAGCTCTCCATCACCCTCCAGGTTGACATTAAAAATGTGGGCTCCAGAGATGGCACTCACACCTTGCTAGTCTTCTCTGCTCCACCTGCACCTTCAGCTGCTCACCATTGGCAACTCCAGAAGCAACTTGTGGCCTTTCAGAAGCTCCATGTTCCTGCCAAGGCTCAACACAGAGTGCGACTTGATATCCACGTTTGCAAACTCCTCAGTGTAGTCGATAAGTCTGGGATTAGGAGAATCCCATTGGGTGAACACAGTTTTCACATTGGCGATGTTAAACACTCTGTTTCACTTCAAGCTGCACCACTTGGGATTATCAAGTCCTGACTCCCACCAGTCACCACTATCTATGTGCCAAGTACATATTACTATTTTCAGTTTCAGCTACAATTTTCCTTCTAAGGAGGACCCATCTATTCAAACCCAAACTGTTTATATACGTCGTAGATTCATTCATCTACACTGTCAAATAACACAATAGGATTCAATCCCTAAACCCTAGTCCCTATCTTTCTATTTTTACAATTTTTATTTTTGTCTTAGTGTTATGAATAAGATTTTTATCATTGTAATTGTAATTGTAACTTCTACTTTACTTTTCTTACCGTTTTCGTAATAAGATTGGCTTCACATCCATTACCATCATGCATGCGCATGTGAGATATAAATGATCTGAT 2686 0.4724 MSRSITAVIGLAMVYLVGHTCEGGEAFACDPKDGRTKSMGFCKESEGIAERVKEVIGRLTMEEKVRMLVNNAAGVPRLGIKGYEWWSEGLHGVSNVGPGVNFNSQFPAATSFPQVITTAASFNASLWEAIGQVVSDEARAMYNGGTAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLAGTYAASYVRGLQGTDANRLKVAACCKHFTAYDLDNWNGMDRFHFNAQRSNCFGVMDTFNLLISLDQHGPYVSEMYELNMQVSKQDIEDTFNVPFRMCVSEGKVASVMCSYNQVNGVPTCADPNLLKKTVRLDLNCGPFLAVHTQNAIKKGLLSEADVNGALVNTLTVQMRLGMFDGEPSAHPYGNLGPKDVCKPAHQELALEAARQGIVLLKNTGPVLPLSTQRVACGYTSPLQGIGNYARTIHEFGCENVACKDEKHFGAAINAAREADATVLVMGLDQSIEAETVDRRGLILPGRQQDLVWKVAAASKGPTILVLMCGGPVDISFAKNNPAIVGILWAGYPGQAGGAAIADILFGTASPGGKLPVTWYPEEYIRKLAMTNMAMRGSKSAGYPGRTYRFYNGPVVYPFGHGLTYTHFVHTLASAPTVVSVPLNGHRRGNLTSLSNTNRAIRVTHARCDKLSITLQVDIKNVGSRDGTHTLLVFSAPPAPSAAHHWQLQKQLVAFQKLHVPAKAQHRVRLDIHVCKLLSVVDKSGIRRIPLGEHSFHIGDVKHSVSLQAAPLGIIKS 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02770 745 Pfam Glycosyl hydrolase family 3 C-terminal domain 386 593 IPR002772 GO:0004553|GO:0005975
Pste5g02770 745 Gene3D Immunoglobulins 621 740 IPR013783 -
Pste5g02770 745 Gene3D - 370 404 IPR036881 GO:0004553|GO:0005975
Pste5g02770 745 Gene3D - 405 594 IPR036881 GO:0004553|GO:0005975
Pste5g02770 745 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 386 596 IPR036881 GO:0004553|GO:0005975
Pste5g02770 745 PANTHER SUGAR HYDROLASE-RELATED 309 733 IPR044993 GO:0009044|GO:0045493
Pste5g02770 745 SUPERFAMILY (Trans)glycosidases 41 385 IPR017853 -
Pste5g02770 745 Gene3D - 31 317 IPR036962 GO:0004553|GO:0005975
Pste5g02770 745 Pfam Glycosyl hydrolase family 3 N terminal domain 105 218 IPR001764 GO:0004553|GO:0005975
Pste5g02770 745 FunFam probable beta-D-xylosidase 2 400 594 - -
Pste5g02770 745 SMART Fn3_like_2 657 730 IPR026891 -
Pste5g02770 745 Pfam Fibronectin type III-like domain 661 728 IPR026891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02770 Pste-Chr5 19978626 19985974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02770 25 745 Glycoside Hydrolase AT1G02640 61.352 0.0 970
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02770 5 19978626 19985974 Pste5g02770 5 19978626 19985974 ECH
Pste5g02770 5 19978626 19985974 Pste4g01562 4 11788005 11793506 PCT