Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01562 GTTCCTCCATGTTATCAGTCCTGAGCAGTATGTTTCTCGTACTGATCCTCCTTTGGGGTGGGGAGGGACGAGAGCCATTTGCCTGTGATCCAAAGAACAGTGGCACAAAGAGCTTACCATTCTGCAGGGAGAAGTTGGCAATAGAAGCAAGGGTGAAGGACCTGATAGGAAGGTTGACAGTGGAAGAAAAGGTTAGGCTGCTAGTGAACAATGCAGCGGGAGTTCCACGCCTTGGAATAAAAGCGTATGAGTGGTGGTCAGAGGCACTTCATGGGGTTTCAAATGTGGGTCCTGGAACCAACTTTCGTGCCCAATTCCCTGCTGCCACTAGCTTCCCTCAAGTCATCACTAGTGCTGCTTCTTTCAATGCCTCTTTGTGGGAAGCAATTGGACGGGTTGTCTCGGACGAAGCAAGAGCCATGTACAATGGAGGAACGGCAGGGTTGACGTACTGGAGCCCAAACGTGAACATTTTTAGGGACCCACGGTGGGGCCGCGGACAGGAGACTCCCGGTGAGGACCCAATACTAGCCGGTAGATATGCAGCCAGTTACGTTAGGGGACTACAGGGAACCGACGGTAACCGGTTGAAAGTCGCTGCCTCTTGCAAACACTTTACGGCTTATGACCTTGATAATTGGAACGGCGTGGATCGCTTTCACTTTAATGCAAAGGTTAGCAAGCAGGACATTGAGGACACGTTCAACGTGCCATTCAGGATGTGCGTGAAGGAAGGAAAAGTGGCGAGTGTGATGTGTTCCTACAATCAGGTTAACGGTATTCCTACCTGTGCGGACCCCAAGCTTCTAAAGAGAACAGTTCGAGGCCAATGGGGTTTGGATTTGGATTGTGGGCCTTTTCTAGCACAGCATACACAGGATGCCGTGAAAAAGGGCCTCTTAAGCGAAGCTGATGTAAATGTGGCTTTGGCGAACACATTAACAGTCCAAATGAGGTTAGGGATGTATGATGGTGAACCATCGGGTCATCCATATGGGAACCTTGGTCCAACAGATGTGTGCACCCCAAGTCACCAAGAGCTTGCCCTTGAAGCCGCAAGACAAGGGATTGTGCTTCTTAAAAACAAAGGTCCTTCTTTGCCCCTCTCCACGAGGCGTCATCGCACTGTGGCTGTTATTGGGCCCAACTCTAATACTATTCACGAGCTGGGCTGTGCAAATGTGGCTTGTACTGATCAAAAACAATTCGGGAGAGCTATAAATGCAGCCCATCAAGCAGATGCAACTGTGCTAGTGATGGGCCTGGATCAGTCCATTGAGGCTGAAACCGTGGACCGGGCTGGGCTGCTTCTTCCTGGGCGTCAACAAGACCTTGTGTCCAAAGTAGCAGCTGCCTCCAAAGGCCCAACAATTTTAGTCATAATGTCTGGTGGACCTGTGGATATAACTTTTGCAAAGAATGATCCTCGAATCCAAGGCATCTTGTGGGCCGGTTATCCCGGTCAAGCTGGTGGCGCTGCTATTGCAGATATCTTGTTTGGAACCGCAAACCCAGGAGGTAAGGTACCTATGACATGGTACCCAGAAGGGTACATTAAAAACTTGGCAATGACAAATATGGCAATGCGAGCAAGCCAATCCAAAGCGTACCCAGGAAGAACCTACCGATTTTACAATGGTCCAGTGGTGTATCCATTTGGTTATGGATTGTCTTACACACATTTTGTTCATATATTAGTTAGTGCGCCCAAAGTGGTCTCAGTTCCTGTGGATGGTCACCGCCACCGCAATAGCTCTAACATTGGGAACAAAGCAATTAAAGTGACACATGCACGATGTGGCAAGCTTTCCATTAGCCTTCACGTGGACGTTAAAAATGTTGGCTCCAGAGATGGCACACACACGTTGTTGGTGTTCTCGGCACCGCCTGTAGGCAATGCTCATTGGGCTCCACACAAGCAACTAGTGGCATTTGAGAAAGTCCATGTTCCTGCTAAGGCCCAACAGAGAGTCGCAATCAACATTCATGTTTGTAAGCTCCTGAGTGTGGTTGACAGGTCTGGAACTAGGAGAATTCCAATGGGGTTGCACAATATTCACATTGGAGATGTTAAACACTCTGTGTCTCTTCAGGCAGAAACACTTGGAATTATCAAGACCTGAATTCCTGGGAATAGGCATAGCTATATTCCATTCACTCCCTCTTTATATTCGTGGCCTTTTCCTTCAAAGTATACAAAGTACTTGCTAAATAACCTCAACATATACATAAGGTTATGAGATAGAAATAGATTTAGTGTCCCAGGGACATCTGAAGTTTTACCTCTAAACTTCCAACATGGTGTTTTGGTTCTAAGGACCATCGATTCACACAGCAAATTGTTGATATGTCATGGCTTCCTACACTGGACATGTTCGATTGATTCATCAAATCCCAGCCAGTAAGGCAACATGGTTGGTTACAATTTTTGGAGAAGAGATTAGAGAATTGTATTGTTCTCTCTCCAATTTATTACTTTATCTTAGATTCTTTTTGCATGTATTTTTATTAATATGTAGCACATTAGTATATTTTGTTAATGTAATTGTAAGATTGGTAATATTAATGGGCTTTTCTTAC 2580 0.4624 MLSVLSSMFLVLILLWGGEGREPFACDPKNSGTKSLPFCREKLAIEARVKDLIGRLTVEEKVRLLVNNAAGVPRLGIKAYEWWSEALHGVSNVGPGTNFRAQFPAATSFPQVITSAASFNASLWEAIGRVVSDEARAMYNGGTAGLTYWSPNVNIFRDPRWGRGQETPGEDPILAGRYAASYVRGLQGTDGNRLKVAASCKHFTAYDLDNWNGVDRFHFNAKVSKQDIEDTFNVPFRMCVKEGKVASVMCSYNQVNGIPTCADPKLLKRTVRGQWGLDLDCGPFLAQHTQDAVKKGLLSEADVNVALANTLTVQMRLGMYDGEPSGHPYGNLGPTDVCTPSHQELALEAARQGIVLLKNKGPSLPLSTRRHRTVAVIGPNSNTIHELGCANVACTDQKQFGRAINAAHQADATVLVMGLDQSIEAETVDRAGLLLPGRQQDLVSKVAAASKGPTILVIMSGGPVDITFAKNDPRIQGILWAGYPGQAGGAAIADILFGTANPGGKVPMTWYPEGYIKNLAMTNMAMRASQSKAYPGRTYRFYNGPVVYPFGYGLSYTHFVHILVSAPKVVSVPVDGHRHRNSSNIGNKAIKVTHARCGKLSISLHVDVKNVGSRDGTHTLLVFSAPPVGNAHWAPHKQLVAFEKVHVPAKAQQRVAINIHVCKLLSVVDRSGTRRIPMGLHNIHIGDVKHSVSLQAETLGIIKT 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01562 704 Gene3D - 393 557 IPR036881 GO:0004553|GO:0005975
Pste4g01562 704 Gene3D - 28 319 IPR036962 GO:0004553|GO:0005975
Pste4g01562 704 FunFam probable beta-D-xylosidase 2 381 557 - -
Pste4g01562 704 Pfam Glycosyl hydrolase family 3 C-terminal domain 354 556 IPR002772 GO:0004553|GO:0005975
Pste4g01562 704 FunFam Probable beta-D-xylosidase 2 581 701 - -
Pste4g01562 704 SUPERFAMILY (Trans)glycosidases 36 353 IPR017853 -
Pste4g01562 704 Gene3D Immunoglobulins 581 701 IPR013783 -
Pste4g01562 704 PANTHER SUGAR HYDROLASE-RELATED 13 278 IPR044993 GO:0009044|GO:0045493
Pste4g01562 704 Gene3D - 338 392 IPR036881 GO:0004553|GO:0005975
Pste4g01562 704 Pfam Glycosyl hydrolase family 3 N terminal domain 102 278 IPR001764 GO:0004553|GO:0005975
Pste4g01562 704 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 354 559 IPR036881 GO:0004553|GO:0005975
Pste4g01562 704 Pfam Fibronectin type III-like domain 620 687 IPR026891 -
Pste4g01562 704 SMART Fn3_like_2 618 689 IPR026891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01562 Pste-Chr4 11788005 11793506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01562 21 704 Glycoside Hydrolase AT1G02640 66.444 0.0 1015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01562 4 11788005 11793506 Pste4g01562 4 11788005 11793506 ECH
Pste5g02770 5 19978626 19985974 Pste4g01562 4 11788005 11793506 PCT