Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02725 TCCAACATGACCTTTTCCCTCTTTTCTTGTCTCTTTTTCCTTCTTTCTGTCTTTTCCACGACTCTGCTGCAACCTTGTCACTCCTTCACTCCCTATTCCCATCACCATCACTTTGCCACACACAACTACAGAGATGCACTCACCAAATCCATCATGTTCTTTGAGGGTCAAAGGTCAGGGAAGCTCCCTTCTAACCAGAGGATGTCTTGGAGGAGGGACTCTGGTCTCTCTGATGGCTCAGCTATGCATGTTGATTTGGTTGGAGGGTACTACGATGCCGGGGACAATGTTAAGTTTGGTTTTCCCATGGCCTTCACCACCACCATGCTTTCGTGGAGTGTTGTTGAGTTTGGAGGGGTGATGGAAGGTGAGTTGCAGAATGCCAGAGAGGCCATTCGTTGGGCCACAGATTATCTTCTTAAAGCTACGGCACATCCAGACACCATTTATGTTCAGGCTAGTTTTCTCTTCTCATTTTGTCTGTCATGTTATATGACCTTGGAGAAAGCAAGGGAAGTGTTATTATTGGTGGGAGATGCTGAGAAGGACCACGCTTGTTGGGAGAGACCTGAGGACATGGATACCCCAAGAAGTGTCTTTAAAGTAGATAAAAACAACCCTGGTTCAGATGTGGCTGCAGAAACTGCTGCGGCTCTTGCAGCTGCTTCTTTGGTTTTCAAAAAAACTGACCCCACCTACTCCAAAACATTAGTTAGGAGGGCTATCCGTGTTTTCCAGTTTGCTGATAAATATAGGGGAGCCTACAGCAATGGCTTGAAGTCCATTGTATGCCCCTTCTATTGCTCATACTCTGGATATCAGGATGAGCTGTTGTGGGGTGCTACTTGGCTTCACAAGGCTACCAAGAACCCAATGTACCTAAACTACATTAAGGTTAATGGGCACACCCTTGGGGCTGCAGATTCTGACAATACCTTCGGTTGGGATAACAAGCATGTTGGAGCAAGGATACTGCTTTCTAAGGTCCAAAATGCATTATTTTTCTCATTTGGCAGTTGGCAGGGCTGGGGATTGGAATTTCTTGTTCGAAAGATGCAATCCCTGCATGACTACAAGGGTCACGCGGACAATTTCATCTGTTCTGTTGTCCCTGGTTCCTCTTACGCCCAATACACCCCAGGCGAGGTCCCTTTTCCATTTTTAAGTCTCAGATGTGTGGTCCAAAGTCCAAAGTTGCCTACTACTTACTTAGCTTTGCTTCCTGGCCCGTCAAGCAGGTGGGCTTTTGTTCAAGATGACAACATGCAATATGTCACTTCTACCTCGTTCATACTCTTGACTTATGCAAAATACTTGACCAAAGCCCATATGGTTGTGAATTGCGGTGGAACAACAGTTACTCCAAAGAGACTCCGGGCTATAGCAAAAAAACAGGTGGATTACTTGCTAGGAGAGAACCCCTTGAAGATGTCGTACATGGTGGGGTATGGGGGAAGGTACCCGGAAAGGATACACCACAGGGGATCATCGCTACCATCGGTGGCTGTTCACCCTGGGAAGATCCAATGCTCAGCAGGATTCAGTGTGATGAACTCTGAATCACCCAACCCCAACATTCTGGTGGGAGCCGTGGTAGGAGGACCGGATCAGCGTGATGGGTTTCCGGATGAACGGTCAGATTATGAGCACTCGGAACCAGCTACTTATATTAACGCACCTCTTGTAGGAGCACTTGCTTATCTCGCACACTCCTTTGCTCAAATCTAGGAACCTCTCTTCTCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGTTTTAATTAATATTAATTATCCATTACTTT 1806 0.4657 SNMTFSLFSCLFFLLSVFSTTLLQPCHSFTPYSHHHHFATHNYRDALTKSIMFFEGQRSGKLPSNQRMSWRRDSGLSDGSAMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVVEFGGVMEGELQNAREAIRWATDYLLKATAHPDTIYVQASFLFSFCLSCYMTLEKAREVLLLVGDAEKDHACWERPEDMDTPRSVFKVDKNNPGSDVAAETAAALAAASLVFKKTDPTYSKTLVRRAIRVFQFADKYRGAYSNGLKSIVCPFYCSYSGYQDELLWGATWLHKATKNPMYLNYIKVNGHTLGAADSDNTFGWDNKHVGARILLSKVQNALFFSFGSWQGWGLEFLVRKMQSLHDYKGHADNFICSVVPGSSYAQYTPGEVPFPFLSLRCVVQSPKLPTTYLALLPGPSSRWAFVQDDNMQYVTSTSFILLTYAKYLTKAHMVVNCGGTTVTPKRLRAIAKKQVDYLLGENPLKMSYMVGYGGRYPERIHHRGSSLPSVAVHPGKIQCSAGFSVMNSESPNPNILVGAVVGGPDQRDGFPDERSDYEHSEPATYINAPLVGALAYLAHSFAQI 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02725 575 SUPERFAMILY Six-hairpin glycosidases 40 571 IPR008928 GO:0005975
Pste5g02725 575 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 541 559 IPR033126 -
Pste5g02725 575 Gene3D - 39 571 IPR012341 GO:0005975
Pste5g02725 575 Pfam Glycosyl hydrolase family 9 43 565 IPR001701 GO:0004553|GO:0005975
Pste5g02725 575 PANTHER ENDO-1,4-BETA-GLUCANASE 25 570 - -
Pste5g02725 575 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 468 494 IPR018221 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02725 Pste-Chr5 19397781 19400009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02725 34 571 Glycoside Hydrolase AT1G02800 67.286 0.0 710
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02725 5 19397781 19400009 Pste5g02725 5 19397781 19400009 ECH
Pste5g02725 5 19397781 19400009 Pste4g01662 4 12455572 12458207 PCT