Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01662 TGTTGGTGGCAGTTTGGTCGTTGGGAGTTCAAAATGACTTTCTCCCTTTCCTTCACGACTGTTGTTTCCCTCTTCTCTCTCATTCTGCTACACGCGAACGCTTTCCCACTTCACCATCGCCACCCTCGCTCCGCCACTCACAACTACCGAGATGCTCTCTCCAAATCCATTCTCTTCTTTGAAGGCCAGAGGTCAGGGAGGCTCCCTCCTAACCAGAGGATGTCTTGGAGAAGGAACTCCGCTCTCTCTGATGGCTCTGCCATGCACGTTGATTTGGTTGGAGGTTACTACGACGCTGGCGACAATGTCAAGTTCGGTTTTCCCATGGCATTCACCACCACCATGCTTTCATGGAGTGTTATTGAGTTCGGTGGCCTCATGAAATCTGAGTTGCAGAATGCCAGAGAGGCCATTCGCTGGGGCACTGATTATCTTCTCAAAGCTACTGTACATCCAAACACCATTTATGTTCAGGTGGGGGATGCTAAGAAGGACCACGCATGTTGGGAGAGACCAGAGGACATGGACACTCCAAGAAGTGTGTTTAAAATAGATGCAAACACACCGGGTTCGGAAGTTGCCGCGGAAACTGCTGCAGCTCTTGCAGCTGCTTCTCTGGTATTTAGAAGAACTGACCCCACATACTCCAGAATTTTAGTGAGGAGAGCCATCAGAGTCTTTCAGTTTGCGGATAAGTACAGGGGATCCTACAGCAATGCCTTGAAACCCTATGTGTGCCCCTTCTATTGTTCTTACTCTGGATATCAGGATGAGCTGTTGTGGGGTGCTGCCTGGCTGCATAAGGCGACCAAGAATCCAATGTACCTGAACTACATAAAAGTAAATGGCCAGATCCTTGGGGCTGCAGAGTTTGACAACACCTTTGGGTGGGATAACAAACATGCCGGAGCAAGAATACTTCTTTCCAAGGAATTCCTGGTTCAAAGGATACAATCCCTCCATGACTACAAGGGCCATGCGGACAATTTTGTGTGTTCTCTAATTCCTGGATCCTCCTTCTCTTCCACCCAATACACTCCAGGTGGTCTTCTTTTCAAGATGAGTGATAGCAACATGCAGTATGTCACATCCACCTCCTTCCTACTGTTAACATATGCCAAATACTTGACACAAGCCCATACAGTTGTTAACTGTGGTGGAATCACAGTAACCCCAAAGAGGCTCCGGACAATAGCTAAGAAACAGGTGGATTACTTGCTTGGAGACAACCCATTGAAGATGTCGTACATGGTGGGGTATGGTCCACGGTACCCACGAAGGATACACCATAGGGGATCATCTCTACCGTCCATTGCTACACACCCGGGAAAGATCCAGTGTTCTGCAGGGTTCAGTGTGATGAATTCGCAATCTCCCAACCCAAATATTCTGGTGGGGGCCATTGTTGGTGGACCAGACCTGCATGATAGGTTCCCAGATCAACGGTCTGATTATGAGCAATCAGAGCCAGCTACATACATTAACTCACCCCTTGTAGGAGCACTTGCCTATCTTGCACATTCATTTGGTCAACTCTAGGCTACAGGTGTATCCCCTTGTTTTATTTTCACTAGTCTGTGGGTAGTTGTATTCCTTAGAACCACACTCATTTGAGACCAGTAGCCTTATAAATTATAAAACTTGTTCACAAGTTTAACTAACTACCATATGTGTAACCTTATCGCTGCCAGCCACGCTTATGTACTACGTATGTTATGTTAAAGTTAAACTCTGATTTGGGAAAGTGGGATATTTGTATGTCGATGGTGTGTTCAACTTCCCAAGAAATTGAAACCAAATTACGAATGTAGAAGGGTTTAATTGTGCATGTTATTTGGGTGGGGA 1845 0.465 CWWQFGRWEFKMTFSLSFTTVVSLFSLILLHANAFPLHHRHPRSATHNYRDALSKSILFFEGQRSGRLPPNQRMSWRRNSALSDGSAMHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFGGLMKSELQNAREAIRWGTDYLLKATVHPNTIYVQVGDAKKDHACWERPEDMDTPRSVFKIDANTPGSEVAAETAAALAAASLVFRRTDPTYSRILVRRAIRVFQFADKYRGSYSNALKPYVCPFYCSYSGYQDELLWGAAWLHKATKNPMYLNYIKVNGQILGAAEFDNTFGWDNKHAGARILLSKEFLVQRIQSLHDYKGHADNFVCSLIPGSSFSSTQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTQAHTVVNCGGITVTPKRLRTIAKKQVDYLLGDNPLKMSYMVGYGPRYPRRIHHRGSSLPSIATHPGKIQCSAGFSVMNSQSPNPNILVGAIVGGPDLHDRFPDQRSDYEQSEPATYINSPLVGALAYLAHSFGQL 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01662 512 SUPERFAMILY Six-hairpin glycosidases 46 510 IPR008928 GO:0005975
Pste4g01662 512 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 405 431 IPR018221 -
Pste4g01662 512 Coils Coil 512 512 - -
Pste4g01662 512 Pfam Glycosyl hydrolase family 9 49 502 IPR001701 GO:0004553|GO:0005975
Pste4g01662 512 PANTHER ENDO-1,4-BETA-GLUCANASE 24 507 - -
Pste4g01662 512 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 478 496 IPR033126 -
Pste4g01662 512 Gene3D - 44 512 IPR012341 GO:0005975
Pste4g01662 512 FunFam Endoglucanase 45 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01662 Pste-Chr4 12455572 12458207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01662 12 508 Glycoside Hydrolase AT1G02800 75.198 0.0 774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01662 4 12455572 12458207 Pste4g01662 4 12455572 12458207 ECH
Pste5g02725 5 19397781 19400009 Pste4g01662 4 12455572 12458207 PCT