Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02631 GCTTCATGTGACTTACACTTCACTTCAACTTTCTAGTGACAGAGAAGGAAGAGACTCACAAGTGGTCCTAAACACAGAATCTGTCAACGCACATAGTTTTAATTCTTTTCTTTAACTTCCATTTCTTTGATACGTTTACGTCAACAACATCGTCACATCACTAGCAGTACCAGGGTGCAATTCTTTACTCAGGTTAGTGTTGTTCGCTGAATTATCGCCCATGGGAGTGGTAACTGTTGGTGAATTGAAGCCTAGCATTTCAGGAAAAAGGACCTTTCGTCCGAGTTCAAGCATAAGGCATGCCACTGAATGGCCAATATCTGATGTCTCTAGTGATCTTACCATCGAAGTAGGAGCGTCAACCTTCGCACTTCACAAGTTTCCTCTGGTTTCTCGGAGTGGAAGAATTCGGAAGCTGCTGCTAGAAGCAAAAGATTCAAAACTTTTACGCATAAGTCTCCCAAATTTGCCAGGTGGTGCAGAGGCATTTGAGCTAGCTGCCAAATTTTGCTATGGAATCTACGTTGAGTTCACTCTCTCAAATGTGGCTTTGCTACGTTGCACGGCCCATTTTCTTCAAATGACCGAAGAATTCGCAGAAAAAAACTTGGAGGCCAGAGCTGAAGCATATCTAAGGGACACAGTGCTCCCTGACATATCAAGCACCGTGTATGTTCTTCACTGTTGTGAGGCCCTTCTTCCCTTGTCAGAGGAAATAAACCTTGTTAACAAGCTAGTCAATGCAATTGCAAACAACGCGTGCAAAGAACAGCTTACATCTGGTTTACAAAAACTCGATCACACTTTCCCTTCTAAAACCACACCAACCATGGAACCAGAAACACCCTCAGATTGGTGGGGAAAGTCTTTCAATGTTCTTAGCCTTGAGTTCTTCCAACGAGTTGTGTCTGTTGTGAAATCAAAGGGACTAAAACAAGACATGATAAGTAAAATATTGATGAACTATGCACACGGTTCTCTTCAGGGGATCAATGTTAGAGACCCCCAAGTGGTGAAAGGAAGTCTTCATGACATAGAATTGCAAAAGAAACAAAGGGTCGTTGTTGAAACCATAGTTGGCTTACTCCCAACTCACTCAAGGAAAAGCCCGGTTCCAATGGGATTCCTCTCAAGTTTGTTGAAAGCTGCAATAGCAACATCCTCATCAACTCTTTGCAGATCTGATTTGGAGAGGCGACTTAGTCTACAACTTGACCAGGCAATTCTTGAAGACATCTTAATCCCGACAAACTCTCCTCAAAACACCCACAACACGATGTATGACACAGACTCAATTCAGAGGATCTTTTCTATTTATGTAAACATGGACGAGGAGGATGGCGAAGATAGTGATAACTACATTGATGAAAGCCAAATGGTGTATGATTTTGACAGTCCTGCATCTCCGAAACAAAGCTCAATCATGAAGGTATCCAAATTGTTGGACAGTTATCTCGCTGAAGTAGCATTAGACTCAAACTTGTTGCCATCAAAATTCATTGCCCTTGCAGAACTGCTTCCAGATCATGCACGTATTGTTAGTGATGGACTTTATAGATCTGTTGATATTTTCCTCAAGGTGAAATTTACTCCCATCGTGTTTAAGCTTGCAAAAAAGGTTCATCCAAACATGAAAGACTCAGAGAGGTACCGGTTATGCAAAACCATTGATTGTCAGAAACTGTCTCAAGAAGCATGCAGCCATGCAGCACAGAATGAAAGGTTGCCAGTGCAGATGGTGGTTCAGGTTCTCTACTTCGAACAAATGAGGCTTCGCAATGCCATGAATGGAGGGCACAACCAATTCTTCTTTGGTCAGTTCCCTCACCGATCAGGGAGTGGTGCAGGAAGTGGAGCCATTTCCCCTAGAGATAACTATGCATCGGTGAGAAGAGAGAACAGAGAACTGAAGCTTGAAGTTGCAAGAATGAGAATGAGGCTCACTGACTTGGAGAAAGATCATGTGTCTATGAAGCAGGAGCTTGTTAAGTCTCACCCTGCCAACAAGTTGTTCAAATCATTCACCAGAAAGCTGAGCAAGCTAAATTCCTTATTCAGGATAAATAGCATTAAACCAATTGGTGGCAAAGCTAGTTCAGAAACTCGCTTCCCTTTTCCAAAGCGAAGACGCCACTCCGTTTCATGACTATATTCAAATACGTAATATATCATCATATATGCCATAATGTATGTACAGTTTGCGTAAACAAAGTAATGCATGGAGTGATTGTGTCTATTTTATAGTCAACAGTTCTTTGAATTATTC 2266 0.4201 MGVVTVGELKPSISGKRTFRPSSSIRHATEWPISDVSSDLTIEVGASTFALHKFPLVSRSGRIRKLLLEAKDSKLLRISLPNLPGGAEAFELAAKFCYGIYVEFTLSNVALLRCTAHFLQMTEEFAEKNLEARAEAYLRDTVLPDISSTVYVLHCCEALLPLSEEINLVNKLVNAIANNACKEQLTSGLQKLDHTFPSKTTPTMEPETPSDWWGKSFNVLSLEFFQRVVSVVKSKGLKQDMISKILMNYAHGSLQGINVRDPQVVKGSLHDIELQKKQRVVVETIVGLLPTHSRKSPVPMGFLSSLLKAAIATSSSTLCRSDLERRLSLQLDQAILEDILIPTNSPQNTHNTMYDTDSIQRIFSIYVNMDEEDGEDSDNYIDESQMVYDFDSPASPKQSSIMKVSKLLDSYLAEVALDSNLLPSKFIALAELLPDHARIVSDGLYRSVDIFLKVKFTPIVFKLAKKVHPNMKDSERYRLCKTIDCQKLSQEACSHAAQNERLPVQMVVQVLYFEQMRLRNAMNGGHNQFFFGQFPHRSGSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMKQELVKSHPANKLFKSFTRKLSKLNSLFRINSIKPIGGKASSETRFPFPKRRRHSVS 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02631 641 Pfam NPH3 family 211 493 IPR027356 -
Pste5g02631 641 Pfam BTB/POZ domain 37 123 IPR000210 GO:0005515
Pste5g02631 641 ProSiteProfiles NPH3 domain profile. 211 517 IPR027356 -
Pste5g02631 641 ProSiteProfiles BTB domain profile. 38 106 IPR000210 GO:0005515
Pste5g02631 641 Coils Coil 553 587 - -
Pste5g02631 641 Gene3D Potassium Channel Kv1.1; Chain A 26 141 IPR011333 -
Pste5g02631 641 FunFam BTB/POZ domain-containing protein At1g03010 16 134 - -
Pste5g02631 641 SUPERFAMILY POZ domain 22 123 IPR011333 -
Pste5g02631 641 PANTHER OS12G0117600 PROTEIN 34 595 IPR043454 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02631 Pste-Chr5 18576486 18580594 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02631 1 454 EF-hand Containing Proteins AT2G47860 59.794 0.0 549
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02631 5 18576486 18580594 Pste5g02631 5 18576486 18580594 ECH
Pste5g02631 5 18576486 18580594 Pste4g01789 4 13346567 13351211 PCT