Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01789 GTTTTGTTGAAATGGGAGTTGTCACTGTTGGAGAATTGAAGCCTAGCATCTCAGGGAAGAGGACCTTCCGTCCAAGTTCAAGTATAAGGCATGCTACTGAATGGCCGATATCTGATGTCTCTAGTGATCTCACCATCGAAATAGGAGCTTCAAGCTTTGCACTTCACAAGTTTCCTCTTGTTTCTAGGAGTGGAAGGATTCGAAAACTGCTGCTAGAAGCAAAAGACTCAAAAGTTTCACGCGTAAGTCTCCCATACGTGCCTGGTGGTGCAGAGGCATTTGAGCTGGCTGCCAAATTCTGTTATGGGATCAATGTTGAGCTCACCCTTTCCAATGTTGCCACGCTAAAATGTATAGCTCATTTTCTAGAAATGACAGAAGAGTTCGCAGAGAAAAACTTGGAGACACGAGCTGAAGCATATCTAAAGGAGACAGTGCTCTCAAATATATCAAACACTATATCTGTTCTTCATCGTTGTGAATCTCTTGTTCCCTTTTCTGAAGAGATCAGCCTTGTCACCAGACTAATCAATGCAATTGCAAACAATGCATGTAAAGAACAGCTCACCACAGGTTTGCAAAAGCTGGACCACAACTTCCCTTCTAAAACCACCTCAAACATGGAGCCCGAAACGCCCTCTGAATGGTGGGGAAAATCTCTCACTGTTCTTAGTCTTGATTTCTTCCAAAGAGTTTTGTCTGCAGTGAAGTCAAAGGGACTAAAACAAGACATGATCAGTAAAATTTTGATAAACTATGCACATAATTCTCTTCAAGGGATAGTTCGGGACCACCAAGCAGTGAAAGGATGTTTTCCAGACTTAGAATTGCAGAAGAAACAAAGAGTAATTGTTGAAGCCATTGCAGGCTTACTACCAACTCAATCAAGGAAAAGTCCGGTTCCAATGGCATTTCTCTCAAGTTTGTTGAAAGCAGCAATAGCTGCATCGGCATCCACTTGTTGCAGATCTGATTTGGAGAGAAGGATTGGTCTACAACTTGACCAGGCAATTCTTGAAGACATCCTAATCCCAACAAATTCACATCAAAATACCCATGGTACTATTTATGACACGGATTCAATTTTGAGGATTTTTTCCAATTTCCTGAACTTGGATGAGGAGGAAGAAGAGGATAATAATCACTTGAGAGATGAGAGTGAAATGATTTATGACTTTGACAGCCCCGGATCTCCAAAACAAAGCTCAATTCTCAAGGTATCCAAATTAATGGACAACTACCTGGCTGAAATAGCACTAGACCCAAACTTGTTGCCATCAAAGTTCATATCTCTAGCTGAACTTCTTCCAGATCATGCACGTATTGTGAGTGATGGACTTTATCGAGCAGTTGATATCTTCCTTAAGGTTCATCCAAACATAAAGGACTCAGAGAGGTACAGGCTGTGCAAAACGATCGATTGTCAGAAACTGTCTCAAGAAGCGTGCAGCCATGCAGCACAAAATGAAAGGCTACCAGTACAGATGGCAGTTCAGGTTCTATACTTTGAGCAAATCAGGCTTCGCAATGCAATGAATGGAGGGCACAACCAATTGTTCTTTGGAGGAGGAGGACTTAATGGTCAATTCCCTCAACGTTCAGGAAGTGGTGCAGGAAGTGGGGCCATTTCCCCTAGAGATAACTATGCATCAGTGAGAAGGGAGAACCGTGAGCTGAAGCTGGAAGTTGCAAGAATGAGAATGAGGCTCACTGACTTGGAGAAAGATCATGTTAACATGAAGCAGGAGCTAGTAAGGTCCCACCCTGCCAACAAGCTATTTAAATCATTCACCAAAAAGCTAAGCAAGCTCAATGCTCTATTTCGGATAAACAGTATTAAGCCAAATGGTTCTGAGAGTCGCTTCCCTTTTCCTAAGAGAAGGCGTCACTCAGTTTCATGACCCCAAAATATGTGTATATATCACAAGGAATGTATAGTATGCAAGATGCATGGCGTGATTGTCACTATTTAATTTCTAGTGAATAGTGCTTTTTGGTTTTTCGGTAATTCTCCTTAATTTGTTTCATGGTGGGATGCTCAATTAAACTACTATCCTCTGCTTGAGAATTTTTACAACTATAGATATCGATAGAACATAACATCTTGGAACCAGAGAACAGTTCAGAGACATCAAACTTTTGGCTTGTTTTCTGAAACACTACAACGCTGAACTGTTGCAATATCCTTCCTCTTCCAGCAATCAGACATATTGGTTAAAATACGTCTGTTATTATTTTGCAGAGTTACCATATAACAACGCTCTATTATAAAAGAAGCAGTGCAATGCAAGTGAGAATGCAATGATCTGTTACAAAATATGTCATGATTACTTCCAACATCTGTGTTCCATTCTTATATGTATAAACTATAGAGTAAACGTGATTTTCAC 2390 0.4071 MGVVTVGELKPSISGKRTFRPSSSIRHATEWPISDVSSDLTIEIGASSFALHKFPLVSRSGRIRKLLLEAKDSKVSRVSLPYVPGGAEAFELAAKFCYGINVELTLSNVATLKCIAHFLEMTEEFAEKNLETRAEAYLKETVLSNISNTISVLHRCESLVPFSEEISLVTRLINAIANNACKEQLTTGLQKLDHNFPSKTTSNMEPETPSEWWGKSLTVLSLDFFQRVLSAVKSKGLKQDMISKILINYAHNSLQGIVRDHQAVKGCFPDLELQKKQRVIVEAIAGLLPTQSRKSPVPMAFLSSLLKAAIAASASTCCRSDLERRIGLQLDQAILEDILIPTNSHQNTHGTIYDTDSILRIFSNFLNLDEEEEEDNNHLRDESEMIYDFDSPGSPKQSSILKVSKLMDNYLAEIALDPNLLPSKFISLAELLPDHARIVSDGLYRAVDIFLKVHPNIKDSERYRLCKTIDCQKLSQEACSHAAQNERLPVQMAVQVLYFEQIRLRNAMNGGHNQLFFGGGGLNGQFPQRSGSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVNMKQELVRSHPANKLFKSFTKKLSKLNALFRINSIKPNGSESRFPFPKRRRHSVS 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01789 629 Gene3D Potassium Channel Kv1.1; Chain A 24 146 IPR011333 -
Pste4g01789 629 Pfam NPH3 family 211 479 IPR027356 -
Pste4g01789 629 PANTHER OS12G0117600 PROTEIN 34 586 IPR043454 -
Pste4g01789 629 SUPERFAMILY POZ domain 22 123 IPR011333 -
Pste4g01789 629 ProSiteProfiles BTB domain profile. 38 106 IPR000210 GO:0005515
Pste4g01789 629 Coils Coil 545 579 - -
Pste4g01789 629 ProSiteProfiles NPH3 domain profile. 211 503 IPR027356 -
Pste4g01789 629 Pfam BTB/POZ domain 37 140 IPR000210 GO:0005515
Pste4g01789 629 FunFam BTB/POZ domain-containing protein At1g03010 16 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01789 Pste-Chr4 13346567 13351211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01789 1 453 EF-hand Containing Proteins AT2G47860 59.504 0.0 544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01789 4 13346567 13351211 Pste4g01789 4 13346567 13351211 ECH
Pste5g02631 5 18576486 18580594 Pste4g01789 4 13346567 13351211 PCT