Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02605 CATAAACTCCTTATCCTCTCTTTTTCTCTCACTCATACACATTTCACACTAGTCTTGCTTGGTGCTGGTGGTGTTTAATGGCGTCTCAGATCTAACAGTGATAGTGCTTAACCGTTTTTGCGCTACTTACTGGTCCTGAAACGACGCCGTGTGGTTGGGTTATTTGTGGTATTTTTCCATATGCAGAGAATGGCGTACAAGTTTTCTTTTCCGGAGGAGGTGCTGGAGCACGTGTTCTCGTTCATTTCGAGCGAGAGGGACAGGAACGCGATCTCACTGGTGTGCAAGTCATGGTACGAGATCGAGCGGTGGTGCAGGAGGAAGGTGTTCGTGGGGAACTGCTACGCGGTGAGCCCTATGATGGTGATCAAGCGGTTCCCGGAGGTGAGATCCATTGCGCTGAAAGGGAAGCCGCACTTTGCGGACTTCAATTTGGTCCCCGACGGGTGGGGCGGTTACGTGTTCCCCTGGATCGCCGCCATGGCACGCGCCTTACCCTGCCTCGAAGAGATCAGACTCAAGAGGATGGTCATCACCGACGACAGCTTGGAACTCATCGCCAAGTCCTTCAAAAACTTTAAGGTCTTGGTTCTCACTTCCTGTGAGGGTTTCACCACCGATGGACTTGCCGCCATTGCTGCCAACTGCAGAGGGGCATTTTTTTGGTTTGATAACGGGATTGAAAGTGATGGTCTGAAACACGTGACAAAAGTTGTATCGGTTTCTTCTAAAGCTTTACTACATGCTTGGAATTTGAGGGAGTTGGACTTGCAGGAGAGTGAAGTGGATGACCTAAGTGGGCACTGGCTAAGCCATTTTCCTGATTCCTACACGTCATTAGTTTCACTTAACATCTCTTGCTTAGGCAGTGAGGTGAGTTTATCTGCACTAGAGCGTCTGCTTGGGAGATGTCCCAACATGCAGACACTCCGCCTCAATAGAGCAGTGCACCTTGATAGACTACCCAACCTACTTCGCCGGTGTCCTCAGCTAGTTGAGTTAGGCACAGGAGTCTACTCAACAGAGATGCGACCAGAGGTCTTCTCAAATCTGGAAGCGGCATTTTCTGGTTGCAAGCAGTTGAAGAGCTTGTCTGGCTTTTGGGATGTCCTCCCATCCTACCTCCCAGCTGCCTATCCCATTTGCTCCAGGCTAATGTCGCTAAACTTGAGTTATGCTACTATTCAGAGCTCCGATCTTATTAAGCTTATCAGTCAATGTCCAAATTTGTTGCGGTTATGGGTGCTGGATTACATAGAAGATTCTGGTCTTGATGCCCTTGCTGCCTCATGTAAGGATCTAAGGGAGTTAAGGGTGTTTCCGTCTGAACCATTTGGTGTAGAACCAAATGTGGCATTGACTGAACAGGGCCTTGTCTCTGTGTCAGAAGGTTGCCCTAAGCTTCAGTCCATTCTATATTTTTGTCGGCGAATGTCTAATGCGGCCCTAAATACAATTGCACGGAATAGGCCTAATTTGACTCGGTTTCGGCTTTGTATTATTGAGCCTCGAACTCCTGACTACCTTACCCTTGAACCTCTGGATTCCGGTTTTGGTGCTATTGTAGAGCATTGCAAGGAGCTTCAACGCCTGTCCTTGTCTGGTCTTCTTACTGATCGAGTTTTTGAGTATATTGGGACTTATGGGAAGAAGTTGGAGATGCTATCTGTGGCTTTTGCTGGAGATAGTGATTTGGGGCTTCATCATGTGCTGTCTGGATGTGATAATCTTAGGAAGCTGGAGATCAGGGACTGCCCCTTTGGTGACAAGGCTCTTTTGGCCAATGCTGCAAAGCTGGAGACAATGCGATCCCTTTGGATGTCCTCCTGCTCAGTGAGTTATGGAGCATGTAAGCTACTGGGTCAGAAAATGCCCAGACTCAACGTTGAAGTCATTGATGAAAGAGGACCTCCAGATTCAAGGCCAGATGATTGTCCTGTTGAGAAGCTTTATATATACAGGACTATTTCCGGGCCAAGATTGGACATGCCTGCTTTTGTTTGGACAATGGAAGATGATTCTTCACTAAGGCTTGAGTGA 2040 0.4799 MQRMAYKFSFPEEVLEHVFSFISSERDRNAISLVCKSWYEIERWCRRKVFVGNCYAVSPMMVIKRFPEVRSIALKGKPHFADFNLVPDGWGGYVFPWIAAMARALPCLEEIRLKRMVITDDSLELIAKSFKNFKVLVLTSCEGFTTDGLAAIAANCRGAFFWFDNGIESDGLKHVTKVVSVSSKALLHAWNLRELDLQESEVDDLSGHWLSHFPDSYTSLVSLNISCLGSEVSLSALERLLGRCPNMQTLRLNRAVHLDRLPNLLRRCPQLVELGTGVYSTEMRPEVFSNLEAAFSGCKQLKSLSGFWDVLPSYLPAAYPICSRLMSLNLSYATIQSSDLIKLISQCPNLLRLWVLDYIEDSGLDALAASCKDLRELRVFPSEPFGVEPNVALTEQGLVSVSEGCPKLQSILYFCRRMSNAALNTIARNRPNLTRFRLCIIEPRTPDYLTLEPLDSGFGAIVEHCKELQRLSLSGLLTDRVFEYIGTYGKKLEMLSVAFAGDSDLGLHHVLSGCDNLRKLEIRDCPFGDKALLANAAKLETMRSLWMSSCSVSYGACKLLGQKMPRLNVEVIDERGPPDSRPDDCPVEKLYIYRTISGPRLDMPAFVWTMEDDSSLRLE 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02605 619 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 10 571 - -
Pste5g02605 619 SMART LRR_CC_2 322 346 IPR006553 -
Pste5g02605 619 SMART LRR_CC_2 405 429 IPR006553 -
Pste5g02605 619 SMART LRR_CC_2 465 488 IPR006553 -
Pste5g02605 619 SMART LRR_CC_2 347 370 IPR006553 -
Pste5g02605 619 SMART LRR_CC_2 105 129 IPR006553 -
Pste5g02605 619 SMART LRR_CC_2 514 538 IPR006553 -
Pste5g02605 619 SMART LRR_CC_2 130 155 IPR006553 -
Pste5g02605 619 CDD F-box_AtTIR1-like 9 46 - -
Pste5g02605 619 SUPERFAMILY F-box domain 6 41 IPR036047 GO:0005515
Pste5g02605 619 Pfam F-box 8 48 IPR041567 -
Pste5g02605 619 FunFam Transport inhibitor response 1 165 610 - -
Pste5g02605 619 SUPERFAMILY RNI-like 32 568 - -
Pste5g02605 619 Gene3D - 3 46 - -
Pste5g02605 619 FunFam Transport inhibitor response 1 6 46 - -
Pste5g02605 619 Gene3D Ribonuclease Inhibitor 47 610 IPR032675 -
Pste5g02605 619 SMART fbox_2 10 51 IPR001810 GO:0005515
Pste5g02605 619 Pfam Transport inhibitor response 1 protein domain 67 113 IPR041101 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02605 Pste-Chr5 18345538 18348599 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02605 5 18345538 18348599 Pste5g02605 5 18345538 18348599 ECH
Pste5g02605 5 18345538 18348599 Pste4g01820 4 13579952 13583539 PCT