Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02541 CCTAATTACACCTATTTCTATAGCGCCGGCAACGTTGGTGACGACCCTCTAAGGAGTTTTGGCCAATACTTACTACAACTTTTGGTCATCAGTAGCAACTTAGATGTAGCGACTAGAATGGACAATCAGAGGGGAGCGAGTATTAATTTCGAGACATTCAAGTGGAAAATTGAAAATTTCTCAAAACAAAACACCAAGAAACTACAATCCAAGGCTTTCCGAATCCGAGGTTATAAATGGCGGATTCGTTTGTATCCATTGATGAAAAATGTTGAACATTTTTCATTATATTTGATGGTTGCGGATTCTTTGCCACCCTTTGGATGGAATAGAAATACTTATTTCAAGTTGGCTCTAGTTAATCAATTGGATGGCCATAAATCAGTTGTAAAGGAGACTCAACAGAAATTCAATGGTGGATATCGTAGTTGGGGTTCATTTTTTGTGAATCTTAGTGACTTCTATGATTCTAAACAAGGCTATCTTGTGAACGATACATGCATTGTTGAAGCTCTTATTTGTGTATCCGATCTTAGCAATCTTGAAGCTAACAATTACTTAAACAAAAGTACTCCAACCATAGACTCTCAATTAGGTGATCAAATAGCAAGAAGTTCAGAATCCACACAACAGGATGATGACAAAGAAACAGAAATATCAGATGAGAGTGAGACACTTAGTTCATCAACCTGTGGATCTAGTCAAACAGAAGGGGAAGTTCAAAGCTCAGATTTGACACTAAAAGACCTTCTAGATTTAGGGAGTTTAGGAAAAGAAGAAGCAATTTTTGTTCCACTACTGGAGGAGGCATGCATGTGGCATCCTTCCCTGATATGGAGCCAGAGGAAAAGTTCAAGATGGTTCAAACTATGGGTATTCTCATCTTTAGGCCAAGTACTGCATTTACTAAAGACAAGTAAGGTGAAGGATATGAATGAAGATGCATGCAATCACCTTCAAGGTTTGTGGGAGGAACTTGTTAAGCATTCCGGATTTCAATTGTCTTGGTTGGAACCTTATGTTCAATCTGCATTGGGTATGAAAGCTCATTTGGAAAAAGCAGCTGAAGTGAATAAACTACAAGACAATGTGGTTACTTTGGAGATTAAAATGAAGAAGTTGAGGAGAGAGTTGGTAGCTGCAGAAGCTGAGTTCGAGGTAGCAAGGAAAGCCTTGGCTGAGGCCAGAAAAGGTTTCATAGAGTTGGATTTGAATGCTGAATTAGGTTATTCCATGTTTTAGACAAATTGCGTACATATAGGAATTAGTGGAGGTTCTTAGTTCCATTTCCTTGCAAATTATGGGTAGAAATTCCTTGGGCACCTCCT 1328 0.3863 PNYTYFYSAGNVGDDPLRSFGQYLLQLLVISSNLDVATRMDNQRGASINFETFKWKIENFSKQNTKKLQSKAFRIRGYKWRIRLYPLMKNVEHFSLYLMVADSLPPFGWNRNTYFKLALVNQLDGHKSVVKETQQKFNGGYRSWGSFFVNLSDFYDSKQGYLVNDTCIVEALICVSDLSNLEANNYLNKSTPTIDSQLGDQIARSSESTQQDDDKETEISDESETLSSSTCGSSQTEGEVQSSDLTLKDLLDLGSLGKEEAIFVPLLEEACMWHPSLIWSQRKSSRWFKLWVFSSLGQVLHLLKTSKVKDMNEDACNHLQGLWEELVKHSGFQLSWLEPYVQSALGMKAHLEKAAEVNKLQDNVVTLEIKMKKLRRELVAAEAEFEVARKALAEARKGFIELDLNAELGYSMF 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02541 413 CDD MATH 52 171 IPR002083 GO:0005515
Pste5g02541 413 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 37 181 IPR008974 GO:0005515
Pste5g02541 413 Pfam MATH domain 57 173 IPR002083 GO:0005515
Pste5g02541 413 SMART math_3 52 154 IPR002083 GO:0005515
Pste5g02541 413 MobiDBLite consensus disorder prediction 223 240 - -
Pste5g02541 413 MobiDBLite consensus disorder prediction 198 240 - -
Pste5g02541 413 ProSiteProfiles MATH/TRAF domain profile. 50 173 IPR002083 GO:0005515
Pste5g02541 413 SUPERFAMILY TRAF domain-like 52 175 - -
Pste5g02541 413 Coils Coil 357 391 - -
Pste5g02541 413 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 50 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02541 Pste-Chr5 17863765 17866265 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02541 5 17863765 17866265 Pste5g02541 5 17863765 17866265 ECH
Pste5g02541 5 17863765 17866265 Pste8g00894 8 4590046 4604240 ECH