Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02435 TCATGGATATTGAGTCAACTACACAAGCAAACAAAGGTGGAATTTTTTCTCGTTTGGGCAATTACCTCAAGGCTTTGCCTGGGAACATCAAGTCCAACACTATCAACTTCACAAGGAGCATAGAAAAGATTGGAAAAGATGACCCCAGAAGAGTAATTCACTCACTAAAAGTGGCACTTGCTCTCACATTGGTATCCTTGGTTTACTACTCCAGGCCTCTTTATGATGGCTTCGGAGTTGCGGGAATGTGGGCTGTTCTTACAGTGGTGGTAGTGTTTGAATTCAGTGTAGGTGCAACCCTCAGCAAAGGTTTAAATAGAGGATGTGCTACATTATTGGCTGGTGCTTTAGGTGTTGGAGGGCAACACATAGCCACTGCTTTTGGAGAAAGAGCAGAACCTATTATCCTTGGGATCCTCGTCTTCATTCTAGCCGCAGGGTCTACTTTTTTCAGATTTTTTCCAAGGATCAAGGCAAGATATGACTATGGGGTTGTGATATTTATGTTAACATTCTGCTTAGTTACTGTGTCGGGGTACAGAGTGGAAGAACTCTTCGAACTTGTACATCAGAGACTTTCAACAATTTTAATAGGAGGAGCAGCTTGCATAGTTATCTCCCTTTTCATCTGTCCAGTATGGGCAGGTGAAGACCTTCACAAGTCGGTGGCTTCCAATATAGAAAAGTTGGCAAATTACCTTGAAGGATTTGAAGCCCAATATTTTCACTGCTCAGAGGATAAAGAAAAATGTGAGAAGTCAGTTCTTGAAGGATATAAAAGTGTTCTCAATTCCAAAGCAAGTGAGGAGTCCTTGGCAAATTTGGCAAGGTGGGAACCGGGACATGGTCATTTCCGTCTTCGACATCCTTGGAAGCAGTACTTGAAGATTGGAGCACTTACTCGGAAATGTGCTTGCAAGATTGAAACCCTTAACAACTACCTTAACCCGGAAATCCAATCATCTTTGGAATTCAAGTGTAAAGTTGAAGAACCATGCAGAAAGATGAGTTCAGAATCCAACAAGGCGTTAAAGGCAATATCTTCATCAATCAAAACAATGACAGACCCGTCAGCTGCCAAAATCCACATAAAAAATTCAAAAAGTGCAGTTGAAGACCTCAAAGTTGCTCTTGAAATCGTTTCATTGGAAGATAATGAACTCCTAGCCATAATCCCAGTTGCCACAGTTGCATCAATACTCGGAGATATCACCAAGTCAGTGGAGAAAATATACGAGTCTGTTTCGGAGCTTTCTCACTTAGCCCATTTCAAGAGTGATATAGAACCCAATGTCTCACCAGAGAAGCCACCCCTTCTTCATCGAGGAATCATAAAACCTGTTGTGGATATTGATAACACAGTCGACCAAATTGAAATTACGATCCAAGAGATAACTGCAGACTCTCCAGAGAAAGAAAATGCACCAAAAAATACCTCCGGT 1442 0.4168 MDIESTTQANKGGIFSRLGNYLKALPGNIKSNTINFTRSIEKIGKDDPRRVIHSLKVALALTLVSLVYYSRPLYDGFGVAGMWAVLTVVVVFEFSVGATLSKGLNRGCATLLAGALGVGGQHIATAFGERAEPIILGILVFILAAGSTFFRFFPRIKARYDYGVVIFMLTFCLVTVSGYRVEELFELVHQRLSTILIGGAACIVISLFICPVWAGEDLHKSVASNIEKLANYLEGFEAQYFHCSEDKEKCEKSVLEGYKSVLNSKASEESLANLARWEPGHGHFRLRHPWKQYLKIGALTRKCACKIETLNNYLNPEIQSSLEFKCKVEEPCRKMSSESNKALKAISSSIKTMTDPSAAKIHIKNSKSAVEDLKVALEIVSLEDNELLAIIPVATVASILGDITKSVEKIYESVSELSHLAHFKSDIEPNVSPEKPPLLHRGIIKPVVDIDNTVDQIEITIQEITADSPEKENAPKNTSG 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02435 480 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 29 429 - -
Pste5g02435 480 Pfam Aluminium activated malate transporter 42 418 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02435 Pste-Chr5 16902442 16904545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02435 1 452 Miscellaneous Gene Families AT3G11680 57.456 1.54e-178 508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02435 5 16902442 16904545 Pste5g02435 5 16902442 16904545 ECH
Pste5g02435 5 16902442 16904545 Pste4g02229 4 16146123 16149576 PCT