Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02229 GATAAACAAAAACAAGACAGTACTAAAAAAATTATCCACAGCATCAAAGTTGGAATCTCCCTTGTTTTGATTTCACTTCTGTACCTCTTGGATCCTCTCTATGAGCAAGTGGGAGAAAATGCTATATGGGCTATTATGACTGTTGTCGTCACTTTTGAATTTTCCGCAGGAGCTACACTAGGGAAAGGTTTAAATCGCGGAATGGGAACTATATTAGGAGGTGGACTAGGTTGCATAGCCGCAGTTTTGGCCCACAATCTTGGTGGAGTTGGCAACTCGATTACCGTTGGTGCTTCTGTATTTTTCTTCGGAGCAATTGCCACATATATTCGATTATTCCCTAGCGTCAAGAGGAGATACGATTACGGAGTTATGATTTTTATTCTCACTTTTAATCTGGTTGCGGTGTCTGGTTTGCGCACTGAAGATCAGGAAGTTTGGAAAATAGCACGTGAACGACTTTTAACAATTGTGATGGGTTTCATTGTGTGCATTTGTGTGAGCTTGTTGGTCTTCCCCTTGTGGGCCAGTGATGAACTTCATGATTCCATCGCCTCTAGATTTCAACACCTTGCCAATTCATTACAAGGCTGCATGGAAGAATATGTCAAATTCGATAGTGAAAAGGAAAATAAGCCTGGTCCTAGCTTCACTCTTTGCAAGTCGTTGTTGGACTCCAAATCAAAGGATGAGATGCTGGCAAATTTCGCAAAATGGGAACCCTGGCATGGAAAATTTGGATTTTTCTACCCTTGGGAAAATTACCTAAAGATTGGAGAGGTTTTTCGCGATCTGGCTTCAACTGTTCTTGTTCTTGGAGGTTGCCTCCAAGCCTCAACTACGCCCAATATGGCATTGGAATCTTGTGAAGCAATTGGGTCACGGATTGTGTGGACTCTGAGAGAACTTGGAGACAGCATGAAGCAAATGAGGAAATGTGAGGCAGAACCTCACATATCAGCAGTGAGATCAGAGCTAAGCTTGTTGATTTCGACATCCAAGTTAGCAGAAATTGAGAATATTGATGCATTATCAACAGCAAGCTTGGTATTCTTACTCAAGAAAGTGGTGGATAAAGTAGAAGAATTGACCAAAGAATTGGAGCAAGTTGGAGATATTGCCGGTTTTCGTGCTCATTCAAATTTAACATCAGTCTCTTCCTAG 1164 0.4167 DKQKQDSTKKIIHSIKVGISLVLISLLYLLDPLYEQVGENAIWAIMTVVVTFEFSAGATLGKGLNRGMGTILGGGLGCIAAVLAHNLGGVGNSITVGASVFFFGAIATYIRLFPSVKRRYDYGVMIFILTFNLVAVSGLRTEDQEVWKIARERLLTIVMGFIVCICVSLLVFPLWASDELHDSIASRFQHLANSLQGCMEEYVKFDSEKENKPGPSFTLCKSLLDSKSKDEMLANFAKWEPWHGKFGFFYPWENYLKIGEVFRDLASTVLVLGGCLQASTTPNMALESCEAIGSRIVWTLRELGDSMKQMRKCEAEPHISAVRSELSLLISTSKLAEIENIDALSTASLVFLLKKVVDKVEELTKELEQVGDIAGFRAHSNLTSVSS 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02229 387 Coils Coil 353 373 - -
Pste4g02229 387 Pfam Aluminium activated malate transporter 5 329 IPR020966 GO:0015743
Pste4g02229 387 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 5 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02229 Pste-Chr4 16146123 16149576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02229 5 334 Miscellaneous Gene Families AT5G46600 41.691 3.23e-88 275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02229 4 16146123 16149576 Pste4g02229 4 16146123 16149576 ECH
Pste5g00832 5 5274962 5275877 Pste4g02229 4 16146123 16149576 PCT
Pste5g02435 5 16902442 16904545 Pste4g02229 4 16146123 16149576 PCT