Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02274 GGAATCATGTGCCAGAGATATTGGTTGGACCATATCTCTTTTCTTTCTTTTTGGTCTTGATTCATTTCCAAGAATGGCATGCATGTACTTTAAAGATCGTAAAATTGAAATCCACCATGTGTCTACTCTGTAATGGCGATAAGATTGAAAGGAGTGGAACTCACAGGGTTCACATGTCTATATTTAGGACTGAGAGGAAATTAACTCAATTGAGAGAGTTTACAAAGTAGGCAATTTTCCCATAGTGCATCATCATCTTAAGCGTGTGATGATTTTCCTCTGTTAAAAGCTCACTGATTGGCAACGAAAATAATGGCAGAAGCAAAAATGACCATAAAGGACAAAAGATGGTCACTCCATGGGATGACTGCTCTAGTCACGGGGCACCAAAGGCATAGGGCATGCGATTGTGGAAGAATTAGCAGAGTTTGGTGCAGCTGTGCATACATGTTCACGAAATCAAGACGATATTGATAAATCTTTACAAGAGTGGAAAAGCAGGGGATTCAATGTGACTGGTTCTGTATGTGATGTACTATGTACTGACCAACGCCGGAGACTATTGGAAACTGTTAGCTCTACCTTTCACGGAAAGCTCAACATTCTAAACACATTAGATCACAGTGTTGAAGATGTATCAAAAGTAATGGGTACCAATTTCGAGTCAGCTTATCATTTAACCCAACTTGCATACCCACTTCTAAAAGAATCTGGATATGGAAGCATAGTGTTTGTTTCGTCCATTGCGGGAGTAAAAGCTCTTCCCCTTTTATCTGCTTATTCAGCTTCTAAAGGAGCCATGAATCAGTTCACAAAGAACGTAGCATTTGAATGGGCAAAGGATAACATTCGCGCAAATGCTGAGAAGATAGGAGTTGAAGAATATAATGCTGCTTTTGTGTCTAAAATACCTGCTGCTTGTGTGGGGGAACCCAAAGAGATATCATCATTAGTTGCTTTTCTGTGTCTTCCAGCCGCGGCATACATCACCGGACAAATAGTGTGCGTAGACGGAGCTCACTGCGCTGCACTGAATAGCAAAATTGGAACAAAAGTAATGGCGGAAACAAGGTTGAGCTTAAAGGACAAAAGATGGTCACTCCATGGGATGACAGCTCTAGTCACAGGAGGCACCCGAGGCATAGGGCATGCCATTGTGGAGGAATTAGCAGAATTTGGATCAGCTGTTCATATATGTTCACGTAAACAATGTGATATTGATAAGTGTTTAGAAGAATGGAAAATCAAAGGATTCAGTGTGACTGGTTCAGTATGTGATTTACAATGTGCTGACCAACGTAAAGGATTAATGGAAATTGTTGGCTCCATCTTTCACGGAAAGCTCCATATTTTAGTGAACAATGCTGCCACAAGTATAACAAAGAAAATAATAGATTACACTGCAGATGATATATCTACCATAATGGCTACCAATTTTGAGTCAGTTTATCATTTGACTCAACTTGCATACCCTCTTCTAAAGAAATCTGGGAATGGGAGCATAGTATTTATTTCCTCCATTGCAGGTTTAAGAGCTCTTCCTTTTTTTTCTGTTTATGCTGCCTCTAAAGGAGCTATGAACCAATTCACCAGAAACTTAGCATTGGAATGGGCAAAGGATAATATTCGCGCAAATGCTGTGGCACCTGGACCTGTTATGACTGAACTTTTGGAGTCTATCAGGAATTCTGCTGGAGGGGATGAGTCTGTGGATGGAATAGTGGATGGAACAGTTGTTGGTCGCATGGGAGAACCTAAAGAGATATCAGCATTAGTTGCTTTCCTTTGCCTTCCAGCTGCATCATACATCACTGGACAATCACAAGAAATTAAAATGGCAGAAACAAAGTTGAGTTGCTTGAAAGACAAAAGATGGTCACTCGATGGCATGACAGCTCTAGTCACAGGAGCCACCAGAGGCATAGGGCATGCAATAGCAGAAGAGTTAGCAGAATTTGGAGCAGCAGTGCATATATGTTCACGTAATCAACAAGATATTGACCAATGTTTGGAAGAATGGAATAGCAAAGGATTTCGAATAACAGGGTCTGCATGTGATGTACTATCCCGTGACCAACGTGAAAATTTAATCAAAACTGTTGCTTCTACCTTTGATGGAAAGCTCAACATTCTGATAAACAATGCTGGAACAACTACAGCTAAAAAACTCCTAGATTATACTGCAGAAGATGTGAGTACAATAATGGGAACTAATTTTGAGTCTAGTTACCACCTATGTCAACTAGCATATCCACTTTTAAAAGCCTCTGGATATGGGAGCATAGTATTCATATCCTCCATTTCTGGTCTGAAAGCTTTTCCTTATAGTTCTATCTATGCATCTTCTAAAGGAGCTATGAATCAACTCACGAAGAACATAGCATTGGAATGGGCAAAGGATCACATTCGTGCAAATGCTGTGGCACCTGGAGTTGTTAAGACCGTACTTCTGGATTCTGTCGTGCAAGCTGCGGTAGAAGCTGATAAAGCCGTTGAGGCAATAGTGTCTCAAACACCGGTTGGTCGACTTGGAGAACCCAGAGAGATATCGGCATTGGTTGCATTTCTTTGCCTTCCAGCTGCTTCATACATCACTGGACAGATTATAACTGCAGATGGTGGAGCTATGAATCAATTCACCAAGAACATAGCATTGGAATGTGCCAAGGATAATATTCGTGCAAATGCTGTGGCACCTGGAATTGTTAAAACCGTAGTTCTCGATTATTACTTGAAATATGCTTATGACAAGGATAAAGCTGTTGAGGCTTTCGTGTATCAAACACCGGTTGGTCGTCTTGGAGATCCTCGGGACATATCATCTGTGGTTGCTTTCCTTTGTCTTCCAGCTGCTTCATATATTACTGGACAGATTATAGCTGTGGACGGTGGTTATATAGTGTAACGTGTTTTGCCAAAAAGATTTGTGAAATAAAACAAATGCTGCCAAACACCAATTCATGTGCAACTAGTGCTTTCACTGCTTTGTGTAGTCCAAGGCACGAAACTCATACTGGTAATTACATGTCTTAACTACTATATTTTAAATTGTTGTCTTATGAAGTTAACTCATCACTGTTACTAAAAAAAATGAGGTACAACACTTTCACCTCAGCAAACAAAGTTCTACATTTATCAAATAAGAAAGTGTGAAGTTTA 3159 0.403 MGTNFESAYHLTQLAYPLLKESGYGSIVFVSSIAGVKALPLLSAYSASKGAMNQFTKNVAFEWAKDNIRANAEKIGVEEYNAAFVSKIPAACVGEPKEISSLVAFLCLPAAAYITGQIVCVDGAHCAALNSKIGTKVMAETRLSLKDKRWSLHGMTALVTGGTRGIGHAIVEELAEFGSAVHICSRKQCDIDKCLEEWKIKGFSVTGSVCDLQCADQRKGLMEIVGSIFHGKLHILVNNAATSITKKIIDYTADDISTIMATNFESVYHLTQLAYPLLKKSGNGSIVFISSIAGLRALPFFSVYAASKGAMNQFTRNLALEWAKDNIRANAVAPGPVMTELLESIRNSAGGDESVDGIVDGTVVGRMGEPKEISALVAFLCLPAASYITGQSQEIKMAETKLSCLKDKRWSLDGMTALVTGATRGIGHAIAEELAEFGAAVHICSRNQQDIDQCLEEWNSKGFRITGSACDVLSRDQRENLIKTVASTFDGKLNILINNAGTTTAKKLLDYTAEDVSTIMGTNFESSYHLCQLAYPLLKASGYGSIVFISSISGLKAFPYSSIYASSKGAMNQLTKNIALEWAKDHIRANAVAPGVVKTVLLDSVVQAAVEADKAVEAIVSQTPVGRLGEPREISALVAFLCLPAASYITGQIITADGGAMNQFTKNIALECAKDNIRANAVAPGIVKTVVLDYYLKYAYDKDKAVEAFVYQTPVGRLGDPRDISSVVAFLCLPAASYITGQIIAVDGGYIV 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02274 752 PRINTS Glucose/ribitol dehydrogenase family signature 564 583 IPR002347 -
Pste5g02274 752 PRINTS Glucose/ribitol dehydrogenase family signature 491 502 IPR002347 -
Pste5g02274 752 PRINTS Glucose/ribitol dehydrogenase family signature 624 644 IPR002347 -
Pste5g02274 752 PRINTS Glucose/ribitol dehydrogenase family signature 538 554 IPR002347 -
Pste5g02274 752 PRINTS Glucose/ribitol dehydrogenase family signature 416 433 IPR002347 -
Pste5g02274 752 PRINTS Glucose/ribitol dehydrogenase family signature 585 602 IPR002347 -
Pste5g02274 752 Pfam Enoyl-(Acyl carrier protein) reductase 1 123 - -
Pste5g02274 752 Pfam Enoyl-(Acyl carrier protein) reductase 421 660 - -
Pste5g02274 752 FunFam Short-chain dehydrogenase reductase 138 399 - -
Pste5g02274 752 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 154 392 IPR036291 -
Pste5g02274 752 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 551 579 IPR020904 GO:0016491
Pste5g02274 752 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 124 IPR036291 -
Pste5g02274 752 Pfam short chain dehydrogenase 156 347 IPR002347 -
Pste5g02274 752 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 414 660 IPR036291 -
Pste5g02274 752 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 291 319 IPR020904 GO:0016491
Pste5g02274 752 Gene3D - 1 140 - -
Pste5g02274 752 PANTHER TROPINONE REDUCTASE 408 659 IPR045000 GO:0016491
Pste5g02274 752 Gene3D - 400 660 - -
Pste5g02274 752 Gene3D - 141 399 - -
Pste5g02274 752 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 32 60 IPR020904 GO:0016491
Pste5g02274 752 FunFam Short-chain dehydrogenase reductase 400 663 - -
Pste5g02274 752 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 491 502 IPR002347 -
Pste5g02274 752 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 544 552 IPR002347 -
Pste5g02274 752 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 564 583 IPR002347 -
Pste5g02274 752 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 659 751 IPR036291 -
Pste5g02274 752 Gene3D - 661 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02274 Pste-Chr5 15325682 15359613 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02274 659 752 Miscellaneous Gene Families AT2G29330 54.255 1.07e-24 102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02274 5 15325682 15359613 Pste5g02274 5 15325682 15359613 ECH
Pste7g02098 7 19265926 19283242 Pste5g02274 5 15325682 15359613 ECH