Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02183 GGGTGAACACTAAACACATTATAAAAGGCACAAAGAGAGAGAATGGAAAGCACCCACAGAGAGAACGTCTAAAACAAAAATAAAAACATTCTCTCCCATTCCTATTTCCTCCTCCCCCCTTAGCCCTTCCTTTGTTTTCTTTTTTGTTCCACCTTCACGTTTTCCTTTGTTCTTTCTTCCGGTTTTAACATCTGAAGCAGAACAGTATTTGTCACAAGTGTTGTGGTCTCCCAGGTCCCGTTTCAGGACAACTACTCATTAGCATATAGAGCTTGTTAAAGCAAAAGAAAAAAAAGTGAAGTGTTTTGAGATCTGGCATGTTATCCTTTTCCCTCTAGCTTTCTTTGTGGTTGTGGGGGTGTGTTGTGCTAGAGTGAGTGACTGACATTCCAGCTCTGCTTCCTTTGTTTTGGCGTGGCCCAGAAGCAAAATAACGATCACGAAAAGAAAAATATTCCACTCAAGTTATTCTTTTAAACCCTTGAGCTTGGCCTTGCTTTGCTTCCCATTCCTCACCAAGCTCCAATGGATCGCTTTTCTTCCAGTTCCATTATCCCCGAAGCATTTCAAGGTGCTAAAGATGATTTCACCATGCAGCTTGCATTGGTTTGGAATCAAATCAAAGAGCCATTGATTGTCCCGCTGCTGAGATTGGCAGTGTTTCTGTGCTTGATCATGTCGGTGATGATGTTCATTGAGAGGGTCTACATGGGCATTGTCATCACTCTGGTGAAGTTGTTTTGGAGAAAGCCAGAGAAGCGTTACAAATGGGAGCCAATGAAGGACGACATAGAGTTGGGGAACTCTTCTTACCCAATGGTTCTCGTTCAAGTCCCCATGTACAACGAAAGAGAGGTTTATCAGCTCTCAATTGGAGCTGCGTGTGGACTTTCTTGGCCTTCAGATAGGATCATCATACAAGTCCTTGATGACTCCACTGACCCAACAATCAAGGAGTTGGTGCAGCTTGAATGCCAAAGATGGGCAAGCAAAGGGGTAAACATAAAGTATGAGGTTAGGGACAACAGAAATGGGTACAAAGCAGGGGCACTCAAAGAAGGCATGAAGCGTAGCTACGTGAAACAGTGTGATTGTGTTGCTATCTTTGACGCTGATTTTCAACCAGAGCCTGATTTCTTGTGGCGCACCGTTCCATTCCTCGTGCACAATCCTGAACTAGCCCTCATTCAAGCGCGGTGGAAATTTGTGAATGCCGATGAATGTTTAATGACCAGAATGCAGGAGATGTCTCTAGATTACCATTTTACTGTGGAACAAGAAGTGGGGTCTTCCACTTACGCCTTCTTTGGCTTCAACGGAACTGCGGGAGTATGGAGAATTTCAGCGCTGAATGGGGCTGGTGGATGGAAGGATAGGACCACAGTGGAAGATATGGACTTGGCTGTGCGAGCCAGTCTCAAAGGATGGAAATTCTTATACTTGTCTGACTTGAAGGTTAAAAATGAATTGCCAAGTACTTTCAAGGCCTACCGCTACCAACAGCACCGTTGGTCTTGTGGTCCAGCCAATCTCTTTAGGAAAATGGTCTTGGAGATCATAAACAACAAGAAAGTGTCATTGTGGAAGAAGATACATGTGATCTACAGCTTCTTCTTTGTTCGGAAGGTCGTAGCACACATCAACACCTTTGTGTTTTATTGCATTGTGTTACCTGCAACAGTTTTGGTACCTGAGGTTGTAGTCCCAAAGTGGGGAGCTGTCTATATCCCTTCCATCATCACTATTCTAAATGCAGTGGGAACTCCAAGGTCACTCCATTTGCTGGTCTTCTGGATTCTCTTTGAGAATGTCATGTCTTTGCATCGAACAAAGGCAACAATTATTGGTATACTAGAGGCTAGTCGAGTGAACGAATGGGTTGTCACTGAAAAACTTGGGGATGCTCTCAAGGCTAAAGCAGGAGGTAAAGCACCTAAAAAGCCTCGATTCAGGATTGGAGACAGGATTCACTTGTTGGAACTTGGTGTCGCATTCTACCTCTTCTTTTGTGGCTGCTATGATGTTATGTTCGGGAAAAACCACTTCTTCATTTTCCTCTTTATCCAATCTCTTGCCTTCTTCATCATGGCATTTGGATATGTTGGCACCGTTGTTCCCAACTCCTAGAAAGGCTTGGCATTTCTTCATTCAGATATTTCAACTTGTGCCTTCATATCAATGTGTATTATAGTGTTTTCAACGTAGTAATGGCAAATCACAGGCTCACAGCTTGTTAGTATAAAAGAAAGGGTGGTCATTCTTTAAGGTGTTGCATAATCAGAGTCGGTGACTCTAAAGAGCTATTTTCTTGTGAATATACTGCAAAGATATATAAGGAAATTACGAAGTTCTTCTCATAAAAGAGAAGTATACAGAACAAGAACGCATCAATCAAATGGCATCGACCCTCAGGGGAGCAAACATCTTTGATTGGAACTTGGAAGCATTGTTTATAAGATTTTGTAGCTCTTCTTAACTTTTCTTTACATTGTATTGTTTGAAGAAATAAGCAGATTCAAGAAATGGGATAAAATACACAAAGTTCCTTTTTGCATTTCCTAATACAAATAACAAAGTTAATATTATACCAAAAACAAGTTGACACTTAAATTGGCTTCATTTATACGATGAAATAGTAGATGGAAAATTAATAACAAAAAAATTGACATCACCCAAGCATCATGCTCTCATAATGTTTACATTCCTGATTCCCTCTCCATCCTTCTTTAACAAAAAAGTGAAAATGACAGACTTTCTTAAAAAATAAAGAGAAATATTTATGCACTGAAATTTAATTACAGTTTTTGATAATTTTGTTGAATTTAATTACATAAAGG 2837 0.4071 MDRFSSSSIIPEAFQGAKDDFTMQLALVWNQIKEPLIVPLLRLAVFLCLIMSVMMFIERVYMGIVITLVKLFWRKPEKRYKWEPMKDDIELGNSSYPMVLVQVPMYNEREVYQLSIGAACGLSWPSDRIIIQVLDDSTDPTIKELVQLECQRWASKGVNIKYEVRDNRNGYKAGALKEGMKRSYVKQCDCVAIFDADFQPEPDFLWRTVPFLVHNPELALIQARWKFVNADECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNGAGGWKDRTTVEDMDLAVRASLKGWKFLYLSDLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMVLEIINNKKVSLWKKIHVIYSFFFVRKVVAHINTFVFYCIVLPATVLVPEVVVPKWGAVYIPSIITILNAVGTPRSLHLLVFWILFENVMSLHRTKATIIGILEASRVNEWVVTEKLGDALKAKAGGKAPKKPRFRIGDRIHLLELGVAFYLFFCGCYDVMFGKNHFFIFLFIQSLAFFIMAFGYVGTVVPNS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02183 533 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 18 528 - -
Pste5g02183 533 FunFam Glucomannan 4-beta-mannosyltransferase 9 88 316 - -
Pste5g02183 533 Pfam Glycosyltransferase like family 2 98 332 - -
Pste5g02183 533 CDD CESA_CaSu_A2 97 333 - -
Pste5g02183 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 89 314 IPR029044 -
Pste5g02183 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 94 373 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02183 Pste-Chr5 14378781 14384362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02183 1 532 Miscellaneous Gene Families AT5G03760 79.925 0.0 926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02183 5 14378781 14384362 Pste1g02799 1 11680410 11686161 ECH
Pste5g02183 5 14378781 14384362 Pste5g02183 5 14378781 14384362 ECH
Pste5g02183 5 14378781 14384362 Pste4g02315 4 16647832 16654374 PCT