Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g02799 ATGCCTGTGTCGGTCGCAGAGATAATAGAGAACAGAAGCGTTGATAGGAGGCAACTGGTGAATAGTGAAGAGGCATTGCCATTTGAATCCCATAAACAGCACTTCCTTTCCTTATCTGTGGACGAAATGGAAGAGTCTCAGACAAAGTTCTTCATCCCAGACTCAATTAATGGCGTGAATTTCGACGTGGCGGCACAGATTAGAATGGTGTGGGAATTGGTGAAGGCGCCGCTGATCGTGCCTCTGCTGAACCTTGCTGTCTACATTTGTCTTGCCATGGCCCTCATGCTCTTCATGGAGAGGGTCTATATGGGCATTGTCATCATACTCGTTAAGCTCTTCTGGAAGAAGCCTCACCAACGCTACAAGTTCGAGCCCCTCCAGGACGATGAGGAACTCGGAAACACTAATTTCCCCGTCGTCCTTGTTCAGATTCCAATGTTCAATGAAAAAGAGGTGTACAAGGTCTCCATTGGAGCAGCTTGTAATCTATCATGGCCTGCGGATCGTCTCGTGATCCAAGTCCTCGATGATTCTACCGACCCTGCTATCAAGCAAATGGTGGAGATGGAATGCCAGAGATGGGCAAGCAAAGGCATAAACATAACATACCAAATCAGAGAAACGAGAGGGGGCTACAAAGCGGGTGCTCTAAAAGAAGGCCTAAAACGTAGCTATGTGAAACACTGCGAGTATGTAGCAATTTTCGATGCAGATTTCAGGCCCGAACCAGATTTTCTAAGACGTTCTATTCCTTTCTTGGTGGGCAACGCCGACATTGCTCTTGTTCAAGCTCGTTGGAGATTTGTGAACGCTAATGAATGTATTTTGACAAGAATGCAAGAGATGTCCCTGGATTACCATTTCACAGTAGAGCAAGAAGTTGGGTCAGCCACTCATGCTTTCTTCGGTTTCAACGGAACTGCTGGTATTTGGAGAATAGCTGCTATCAATGAAGCTGGAGGGTGGAAAGACAGAACAACAGTGGAAGATATGGACCTTGCTGTTCGTGCTAGTCTTAGGGGATGGAAATTTTTGTACCTTGGAGACCTCCAGGCCAAAAGTGAGCTTCCTAGTACTTTAAGAGCATTCAGATTCCAGCAGCACCGATGGTCTTGTGGTCCTGCTAATTTGTTCCGCAAAATGGTGATGGAGATAGTGAGGAACAAGAAAGTTAAGTTTTGGAAGAAAGTGTACGTTATTTACAGCTTCTTCTTTGTTCGGAAAATCATAGCCCACATGGTCACTTTCTTCTTCTACTGTGTTGTAATTCCTCTTACAATCTTGATCCCTGAGGTTCATGTTCCAATCTGGGGAGCTGTTTATATTCCTTCCGTCATCACCATTCTCAATTCAGTTGGAACACCAAGGTCCATTCACCTTCTGTTCTATTGGATCCTCTTTGAGAATGTGATGTCTTTGCACCGTACCAAGGCAACATTTATAGGTCTATTAGAATATGGGAGGGCTAATGAATGGGTTGTAACTGAAAAACTTGGTGACTCTGTCAACAATAATAAGAATAAATCAGGAGATGCTGCCAAGAAGAATAATGTCATCAAGGCCGCCCCCAAAAAGACTCGATCCAAATTTGTTGAAAGACTTAATTTACTGGAGCTGGGATTTGCTGCTTTCCTCTTCTTGTGTGGATGCTATGATTTTGTGCATGGGAAACACAACTACTTCATCTACCTCTTCCTTCAGACCATAACATTCACAATTGTAGGATTTGGCTACGTTGGCACCATCGTGTAAACCTCAATTGAGCCAAATTCTCATGTTACTTAAGTTTCATCATTGTTGTGTCCATATTTTTCTAGTTTCTCCTCAAAAAAATACATCAAGGGGGGCTGATTTCTTCAAGCAACAAGTGCTGTACCAAATCATCTACAACAGCTAGTTTAGCTCAAATCATTTTCTATTAGGAAAGAAAAGTCCTTTCCAAGATTTCATTGTCATCAATCAAGAAGATACAAATCATCACAGGCAAAGTGCTGTTACTACTAGAATTGCATTACACAGGCTTAATGGCAGCTATGAAGATGTACCAAAAAATGCTTCAATTAGAGCTATAGACATGAAGTAGACAGTGTGATTTTGTTTGCATAGATTGTTTTGTGAGATTTTATAGTTATATATATTTCGTGAGTCCTTTATTTGTTAGGTTTGCTTAGTCTGAGCCAAATAATATGGTGGACAAAAATGCTTCTAATTCATGTTATTTGTCATTTTTTCCCCCAAGGAATGAATTTTATTTACCATACATGCAATCATCTGCTACCTTCTTTGACATATTGTTCATGTGTGGAGAACTAGAGAGTAAAATAAAGTCATCCTTGAAATTTTACCTATG 2353 0.4152 MPVSVAEIIENRSVDRRQLVNSEEALPFESHKQHFLSLSVDEMEESQTKFFIPDSINGVNFDVAAQIRMVWELVKAPLIVPLLNLAVYICLAMALMLFMERVYMGIVIILVKLFWKKPHQRYKFEPLQDDEELGNTNFPVVLVQIPMFNEKEVYKVSIGAACNLSWPADRLVIQVLDDSTDPAIKQMVEMECQRWASKGINITYQIRETRGGYKAGALKEGLKRSYVKHCEYVAIFDADFRPEPDFLRRSIPFLVGNADIALVQARWRFVNANECILTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGIWRIAAINEAGGWKDRTTVEDMDLAVRASLRGWKFLYLGDLQAKSELPSTLRAFRFQQHRWSCGPANLFRKMVMEIVRNKKVKFWKKVYVIYSFFFVRKIIAHMVTFFFYCVVIPLTILIPEVHVPIWGAVYIPSVITILNSVGTPRSIHLLFYWILFENVMSLHRTKATFIGLLEYGRANEWVVTEKLGDSVNNNKNKSGDAAKKNNVIKAAPKKTRSKFVERLNLLELGFAAFLFLCGCYDFVHGKHNYFIYLFLQTITFTIVGFGYVGTIV 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g02799 584 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 60 582 - -
Pste1g02799 584 CDD CESA_CaSu_A2 139 375 - -
Pste1g02799 584 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 130 358 IPR029044 -
Pste1g02799 584 FunFam Glucomannan 4-beta-mannosyltransferase 9 130 358 - -
Pste1g02799 584 Pfam Glycosyl transferase family group 2 232 431 IPR001173 -
Pste1g02799 584 SUPERFAMILY Nucleotide-diphospho-sugar transferases 136 419 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g02799 Pste-Chr1 11680410 11686161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g02799 43 584 Miscellaneous Gene Families AT5G22740 80.847 0.0 915
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g02799 1 11680410 11686161 Pste1g02799 1 11680410 11686161 ECH
Pste5g02183 5 14378781 14384362 Pste1g02799 1 11680410 11686161 ECH
Pste4g02315 4 16647832 16654374 Pste1g02799 1 11680410 11686161 ECH