Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g02015 ACACAACGAGAAGGGAAATTGTGCGGTGAAAAGCACCAAATATCGGGGGTTAATCCAGCTATTGCTTTCAGAGCTCAGACAAGAATACCTGTAGCCTTCAATGAAGACGGAAAAGCCTACAGACACAAGCCTAGAATCATTCTCCTTTCTGCTAACACTTTAACTTGCTTTTTCTTCATGGCTCTCTTTCTCTTTGCTATTTTAATCTTGATGGTCCCTTCAAGCAATGCCTATTGGCCACCTTCACCTGGCTACTGGCCAAGTTCCAAATTCAGGTCCGTGAGTTTTTACAAAGGTTTTAGAAATCTCTGGGGCCCTCAGCACCAAAGTCTGGACCAAAATGCATTAACAATCTGGCTTGATAGAACCTCAGGAAGCGGCTTCAAGTCAGTAAGGCCATTTCGATCAGGGTATTTTGGCTCTTCCATTAAGGTCCAACCTGGCTACACTGCAGGAGTTATAACTGCTTTCTATCTCTCAAACAATGAAGCACATCCTGGTTTCCATGATGAAGTAGACATTGAGTTTCTTGGGACAACATTTGGAAAGCCTTATACTTTACAGACAAATGTTTACATTAGAGGGAGTGGAGATGGGAGAATTGTAGGCAGAGAGATGAAGTTCCATCTTTGGTTTGATCCTACCCAAGATTTTCATCACTATGCTATACTGTGGAGTCCCAACGAAATAATATTCCTGGTGGATGACGTGCCGATAAGGAGGTACCCGAGGAAGAGTGGTGCAACATTTCCTCTGAGGCCAATGTGGCTATATGGTTCAATATGGGATGCCTCATCATGGGCAACTGAAGATGGAAAGTACAAAGCTGATTACAAATACCAACCTTTTGTAGCAAAGTATACCAACTTCAAAGCTAGTGGTTGTTCAGCCTATGCCCCTCATTGGTGCCATCCAGTTTCAGCCTCACCATATAGGTCTGGTGGGTTGACTAGACAACAACATAGAGCCATGAGATGGGTGCAAAGATATCACATGGTTTATAACTATTGTCAAGACCCCAAGAGAGATCACAGTCTAACACCTGAGTGCTGGGGTTGAAGTATTGAAATTGAACACCAAGCCAAGTGAGGATGATGTTGCTGATTTTTGGTCACCAAAACCAAAACACTGTTCTCTTGTGATGTGTTTTGTATTTTTCTTTCAGAAAGTTTCTTTTACATTATAGGGGTCACTTGAGATGGGCCCCCCCAACTTGGCAGCTACATTATGCAAGTGTACGGGGTTGTGCATCCAAGGCTCTCAAGACACGAGAATATTTGGAAGATTGTGTGTGTGTTTTTCTTTTAGACAAAGGAAAAAAGAAAACAAAGGGAAGAGGGAGGAAAAGGAATAATATCTATGTCCAATGGAAAGCAAAGTGGCCAATGTGTATGGGTCGGTGAATGTGGAACCATTGAGTGCCAATACTAAAAGCATACTCTTCATTTAATAATGTTATTGTCATTTTAATGATGAAAACGAGAACCTATGTATGTCTGTTGTGGGGAGGGGTTATTGTGTTTTGTTCCAAGACTAGTGTCATGTGAAACTTGTTTATTACCACCACGGAAAAGTTTGTTGCATTATGAAAAAAGATCGCATGATTCTGTAAGAGGTTGTGGACCATTGGTTTGATTGGAAAGCAGATGAAAAAAGAAATGAAAATAATTACAAAAGC 1678 0.4136 TQREGKLCGEKHQISGVNPAIAFRAQTRIPVAFNEDGKAYRHKPRIILLSANTLTCFFFMALFLFAILILMVPSSNAYWPPSPGYWPSSKFRSVSFYKGFRNLWGPQHQSLDQNALTIWLDRTSGSGFKSVRPFRSGYFGSSIKVQPGYTAGVITAFYLSNNEAHPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGRIVGREMKFHLWFDPTQDFHHYAILWSPNEIIFLVDDVPIRRYPRKSGATFPLRPMWLYGSIWDASSWATEDGKYKADYKYQPFVAKYTNFKASGCSAYAPHWCHPVSASPYRSGGLTRQQHRAMRWVQRYHMVYNYCQDPKRDHSLTPECWG 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g02015 352 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 93 350 IPR044791 GO:0004553
Pste5g02015 352 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 312 350 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Pste5g02015 352 Gene3D - 76 350 - -
Pste5g02015 352 Pfam Glycosyl hydrolases family 16 98 279 IPR000757 GO:0004553|GO:0005975
Pste5g02015 352 SUPERFAMILY Concanavalin A-like lectins/glucanases 118 338 IPR013320 -
Pste5g02015 352 FunFam Xyloglucan endotransglucosylase/hydrolase 83 351 - -
Pste5g02015 352 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 11 287 IPR000757 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g02015 Pste-Chr5 12798686 12801816 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g02015 60 350 Glycoside Hydrolase AT3G44990 64.948 7.83e-143 404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g02015 5 12798686 12801816 Pste5g02015 5 12798686 12801816 ECH
Pste5g02015 5 12798686 12801816 Pste4g02010 4 14871301 14873810 PCT