Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01840 TCTAGTCATTCAATTCCACCCTGAAGGTGGTCATTTTTAGAGAGGGTTCCAAGATGGGTTCACTAGAAAGATCAAAGAAGAAAGTTCTCTTGTGGAAGAAGGCCATGCTCCATTTTTCCTTATGTTTCGTAATGGGTTTTTTCACAGGCTTAGCTCCAACAGGTAAATCTTCTCTCTTTTCCACCAAAGTTGCTGTCTCAAATAGGACTGAATATGCACCACAACCTAGTGAAGTGTCACACCTCACAACGAATGTCAATAGAAGTTGGATAGCTCCAGCTCCAGTGGCCATGCCCATGAAGCCTGGAACCCTAGAAAATAAAAAACCAACAAAGTTGCATGTAACTTCACAACCCCAGTTGAAGCCTAGAAGACTCATAATCATTGTGACTCCAACAAGCACAAAACTACCTCACCAAGCAGTGTTTTTAAGAAGGTTGGCAAATACTATAAAGCTGGTTCCACAACCGTTGCTGTGGATTGTTGTGGAAGCTAAAACAAACTCCACAGAACTGCCGGAAATATTAAGGAAAACTGGCATCATGTATAGGCATGTGGTTTTCAAGGAAAATTTCACTGGATTAGAAGCTGAATTGAATCACCAGAGAAACCTTGCGCTTAAGCATATTGAGCACCACAGGCTCAATGGCATTGTACACTTTGCTGGCCTTTCCAATGTTTATGATCTCCAATTCTTCCATCAGCTTAGAGATATTGAGGTGTTTGGAACATGGCCAACCGCATTGTTAGCTGCACACAGGAAGAAAGTAAAAATAGAAGGACCCGTATGTGATTCATCACAAGTCATTGGTTGGCATCTAAGGAATATGAACAATGAAACTGATACAATCACTCCCCCCATTCATATTTCAAGTTTTGCTTTTAATAGCTCCATCCTTTGGGACCCTGAGAGATGGGGTCGTACTTCCTCTGTTCAAGACACTTCTCAGAATTCAATCAAGTTCGTGAAGCAAGTAGTTCTAGAAGATGAGGCTAAATTAAAGGGAATTCCACCAGAGGACTGCTCCAAAATCTTGCTTTGGCGTTTCAATTTTCGTGCACGAACCACCTCAGGTCACTAATTTCTAGATTTAGTCGAAGGCAAAGGAGAACCACATAAAATAATCAGTGTTGAAGCAATATAGAAATTGGCAGCACAGGAATTACTTCCCTACCACTATATAGAATTTATTCATTTTTTTCTCTTTTGCAAATGTATCCTATGTTTAATTGTTTATAGTTTTATGATTCTTCATGTTTGCAAATTTTTTGTTAGCTTATGTGAGAGGCTCTTCCGCTAAGAAGCAAAACATTTAAAGCATATATGATCTTCTTCGAAAAAAAGCTTTACCG 1353 0.3962 MGSLERSKKKVLLWKKAMLHFSLCFVMGFFTGLAPTGKSSLFSTKVAVSNRTEYAPQPSEVSHLTTNVNRSWIAPAPVAMPMKPGTLENKKPTKLHVTSQPQLKPRRLIIIVTPTSTKLPHQAVFLRRLANTIKLVPQPLLWIVVEAKTNSTELPEILRKTGIMYRHVVFKENFTGLEAELNHQRNLALKHIEHHRLNGIVHFAGLSNVYDLQFFHQLRDIEVFGTWPTALLAAHRKKVKIEGPVCDSSQVIGWHLRNMNNETDTITPPIHISSFAFNSSILWDPERWGRTSSVQDTSQNSIKFVKQVVLEDEAKLKGIPPEDCSKILLWRFNFRARTTSGH 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01840 342 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 13 339 IPR005027 GO:0015018|GO:0016020
Pste5g01840 342 FunFam Glycosyltransferases 107 342 - -
Pste5g01840 342 CDD GlcAT-I 107 336 IPR005027 GO:0015018|GO:0016020
Pste5g01840 342 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 108 342 IPR029044 -
Pste5g01840 342 Pfam Glycosyltransferase family 43 129 333 IPR005027 GO:0015018|GO:0016020
Pste5g01840 342 SUPERFAMILY Nucleotide-diphospho-sugar transferases 107 336 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01840 Pste-Chr5 11630767 11633177 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01840 1 338 Glycosyltransferase AT2G37090 61.714 7.18e-153 432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01840 5 11630767 11633177 Pste5g01840 5 11630767 11633177 ECH
Pste5g01840 5 11630767 11633177 Pste4g02288 4 16452990 16454232 PCT