Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02288 ATGGGATCACTAGAAAGATCAAGAAAGAAAGTCATGTTATGGAAGAAAGCTATGTTGCATTTTTCTCTCTGTTTTGTTATCGGGTTCTTCATGGGCTTTGCTCTTACAGGTAAATCCATATTTCACAGCTATGGTGATTATTCGAAAAGGTCAGAATTTGCATCACAACCTATTCAAGTGTCACATCAGACAACAAATGTCAATAGAAGTTGGATAGCTCCAACACCAGTGTTCACAAGGTCTACATTCCATAAGCAAACAAAATTGCATGTAAAACCACTGCTCCAGTTGAAGCCAAGAAGACTTATAATCATTGTAACTCCAACAAGCACAAAGCTTCCCTTTCAAGCAGTGGTTTTGACAAGGTTGGTTAATACTATAAAGCTGGTTCCTCAACCATTGCTGTGGATTGTTGTGGAAGGGCAAACGGACTCCACGGAGCTTTCAAAGACACTTAGGAAGACAGACATCATGTATAGGCATTTGGTTTCCAAGGAAAACTTCATGGATTTGGAAGCTGAAATGAATCACCAGAGAAATCTTGCTCTCAAACACATTGTGCATCACAGGCTAACTGGGATCGTGCACTTTGCTGAGCTTTCCAATGTTTATGATCTCGAATTCTTCCAACAACTAAGATATATTGAGGCATTTGGAACATGGCCAACGGCATTGTTGGCAGCAAACATGAAGAAAGTGATAATAGAAGGACCTGTGTGCGATTCTTCACAAGTCATAGGCTGGCATTTAAGGAATATGAACAACGAAACTGATACAATCACTCCTCCAATTCATATTTCAAGTTTTGCATTCAATAGTTCCATCCTTTGGGACCCTGAGAGATGGGGTCGCACTTCTTCTCTTCAAGACGCCTCTCAGCTACAAATTATATCCTATATCCAAATTATTTACTATTATATAAATTAG 927 0.3927 MGSLERSRKKVMLWKKAMLHFSLCFVIGFFMGFALTGKSIFHSYGDYSKRSEFASQPIQVSHQTTNVNRSWIAPTPVFTRSTFHKQTKLHVKPLLQLKPRRLIIIVTPTSTKLPFQAVVLTRLVNTIKLVPQPLLWIVVEGQTDSTELSKTLRKTDIMYRHLVSKENFMDLEAEMNHQRNLALKHIVHHRLTGIVHFAELSNVYDLEFFQQLRYIEAFGTWPTALLAANMKKVIIEGPVCDSSQVIGWHLRNMNNETDTITPPIHISSFAFNSSILWDPERWGRTSSLQDASQLQIISYIQIIYYYIN 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02288 308 SUPERFAMILY Nucleotide-diphospho-sugar transferases 101 293 IPR029044 -
Pste4g02288 308 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 13 298 IPR005027 GO:0015018|GO:0016020
Pste4g02288 308 Pfam Glycosyltransferase family 43 123 291 IPR005027 GO:0015018|GO:0016020
Pste4g02288 308 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 101 301 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02288 Pste-Chr4 16452990 16454232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g02288 1 303 Glycosyltransferase AT2G37090 54.545 7.98e-118 341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02288 4 16452990 16454232 Pste4g02288 4 16452990 16454232 ECH
Pste5g01840 5 11630767 11633177 Pste4g02288 4 16452990 16454232 PCT