Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01733 ATGGGACCACTGGAGAAACTGTCAGACCTAACTAGTGCATTTTGTGTTCCGTGTTTGCCCCATTCACCATCTTCTTCTTCTTCGCCTCTTTTCTACCACTTTTTGAACCCTCATGCAAAGTGGGGAAATGAAAACTTGACAAGTTTGAACTCCAACAAAGTAGTAAAGATACATATCCCAAAGATGATGAAGAAACAATTGACAGGTATACGGGGCGATTCTCCCCTACAATCAGCTATCCGAGCTGGAAATTTAGAATTGGTTCTGGAAATCATTTCTCAGAGTCCAGGGGAAGAATTGAAGGAGTTGCTTTCAATGAAGAACAACTCTTGTGAAACTGCCTTATATGTTGCTGCTGAAAATGGTCATCTTGACATAGTGAAGGAATTGATTAGATACCATGATATTGGGTTGGCCGGCTTTAAAGCTAGAAATGGATTTGATGCATTCCATATTGCTGCTAAAAATGGACATTTGGAGATATTGAAGGTCCTCATGGAGCTCATTCCTGAAATTTCATTGACTGTTGATCTGACAAACACTACTGCATTGCATACTGCTGCAGCTCAAGGACATATTGAGGTAGTAAATTTTCTCTTGGAAACAGGCAGCAGTCTGGTCACTATAGCAAAAAGCAATGGGAAAACTGTATTGCATTCTGCTGCAAGAAATGGCCACGTGGAAATTATCAAGGCCATTCTGAGCAAAGAGCCTGATATTGCAATAAGAATTGATAAGAAGGGGCAGACAGCACTCCATATGGCAGCTAAAGGACAGAATCTTGAGTTGGTGGACGAGCTTGTGAAACTGAATCCATCTGTGGCTAATATGGTAGATGCGAAGGGAAACACTGCACTGCATATAGCAACACGGAAGGGTCGTTTACTGTTTGTTCAGAAGCTATTAAATTGCAGAGAAATAGACACAGATATTATCAATAAATCTGGAGAAACTGCTTTAGATACCGCAGAGAAAAATGGTCGCTTGGAAATCGCCAGCTTTTTGCAACATCGTGGAGCTCAAAGTGCCAAGTCCATCAAGTCGCCTACTACAAACACGGCCCTTGAGCTCAAAAGAACAGTGAGTGACATAAAAAGTGGGGTTCATAACCAGCTGGAACACACATTCAAAACACAAAGACGTATGCAAGGTATAGCAAAGCGAATTAACAAAATGCACACTGAGGGGCTTAACAATGCTATCACCTCCAACACTGTTGTTGCTGTCTTAATTGCAACGGTTGCTTTTGCTGCCATATTTAATGTCCCGGGCCAGTATCCAGAGAAGCAAGTCCCTCCTGGCTTATCTCCTGGGGAAGCATATATTGCTCCTGATATTGGATTTATGATATTCATAATCTTCGATTCTACTGCCCTCTTCATATCATTAGCTGTTGTGGTTGTCCAAACATCTGTGGTTGTTATTGAGAGGAAAGCAAAGAGACAAATGATGGCAGTTATAAACAAGTTGATGTGGGTTGCATGTGTGCTAATTTCTGTGGCATTTATTGCGATGTCTTACATAGTTGTCGGGGATCATAAAGAATTGGCTATAGCAGCCACAGCTCTAGGAACAGTGATTATGGCAGCTACTTTAGGAACACTCTGTTACTGGGTGATTGCTCACCGCCTTGAGACCTCAAGATTGCGAAGTCTTAGAACAACAATGAGCAGCAGACAGTCTATGTCTATGTCAATGATGTCAGGATCGGAGAATGAGTACAAGACAGTTTATGCAATATAA 1743 0.4165 MGPLEKLSDLTSAFCVPCLPHSPSSSSSPLFYHFLNPHAKWGNENLTSLNSNKVVKIHIPKMMKKQLTGIRGDSPLQSAIRAGNLELVLEIISQSPGEELKELLSMKNNSCETALYVAAENGHLDIVKELIRYHDIGLAGFKARNGFDAFHIAAKNGHLEILKVLMELIPEISLTVDLTNTTALHTAAAQGHIEVVNFLLETGSSLVTIAKSNGKTVLHSAARNGHVEIIKAILSKEPDIAIRIDKKGQTALHMAAKGQNLELVDELVKLNPSVANMVDAKGNTALHIATRKGRLLFVQKLLNCREIDTDIINKSGETALDTAEKNGRLEIASFLQHRGAQSAKSIKSPTTNTALELKRTVSDIKSGVHNQLEHTFKTQRRMQGIAKRINKMHTEGLNNAITSNTVVAVLIATVAFAAIFNVPGQYPEKQVPPGLSPGEAYIAPDIGFMIFIIFDSTALFISLAVVVVQTSVVVIERKAKRQMMAVINKLMWVACVLISVAFIAMSYIVVGDHKELAIAATALGTVIMAATLGTLCYWVIAHRLETSRLRSLRTTMSSRQSMSMSMMSGSENEYKTVYAI 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01733 580 Gene3D - 44 167 IPR036770 -
Pste5g01733 580 ProSiteProfiles Ankyrin repeat profile. 247 279 IPR002110 GO:0005515
Pste5g01733 580 Pfam Ankyrin repeats (3 copies) 213 270 IPR002110 GO:0005515
Pste5g01733 580 Pfam Ankyrin repeats (3 copies) 54 136 IPR002110 GO:0005515
Pste5g01733 580 Pfam Ankyrin repeats (3 copies) 142 206 IPR002110 GO:0005515
Pste5g01733 580 Gene3D - 168 344 IPR036770 -
Pste5g01733 580 ProSiteProfiles Ankyrin repeat region circular profile. 213 240 - -
Pste5g01733 580 ProSiteProfiles Ankyrin repeat region circular profile. 179 206 - -
Pste5g01733 580 ProSiteProfiles Ankyrin repeat profile. 179 211 IPR002110 GO:0005515
Pste5g01733 580 ProSiteProfiles Ankyrin repeat region circular profile. 145 167 - -
Pste5g01733 580 ProSiteProfiles Ankyrin repeat region circular profile. 247 269 - -
Pste5g01733 580 ProSiteProfiles Ankyrin repeat profile. 281 314 IPR002110 GO:0005515
Pste5g01733 580 SUPERFAMILY Ankyrin repeat 75 340 IPR036770 -
Pste5g01733 580 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 63 564 - -
Pste5g01733 580 ProSiteProfiles Ankyrin repeat profile. 213 245 IPR002110 GO:0005515
Pste5g01733 580 Pfam Domain of unknown function 395 509 IPR026961 -
Pste5g01733 580 ProSiteProfiles Ankyrin repeat region circular profile. 281 303 - -
Pste5g01733 580 ProSiteProfiles Ankyrin repeat profile. 145 167 IPR002110 GO:0005515
Pste5g01733 580 SMART ANK_2a 213 242 IPR002110 GO:0005515
Pste5g01733 580 SMART ANK_2a 247 276 IPR002110 GO:0005515
Pste5g01733 580 SMART ANK_2a 71 102 IPR002110 GO:0005515
Pste5g01733 580 SMART ANK_2a 281 311 IPR002110 GO:0005515
Pste5g01733 580 SMART ANK_2a 110 138 IPR002110 GO:0005515
Pste5g01733 580 SMART ANK_2a 179 209 IPR002110 GO:0005515
Pste5g01733 580 SMART ANK_2a 315 344 IPR002110 GO:0005515
Pste5g01733 580 SMART ANK_2a 145 174 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01733 Pste-Chr5 11019463 11023405 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01733 59 580 Miscellaneous Gene Families AT1G07710 62.825 0.0 601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01733 5 11019463 11023405 Pste4g00218 4 1815250 1816126 ECH
Pste5g01733 5 11019463 11023405 Pste5g01733 5 11019463 11023405 ECH