Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00218 GTTTCTGTGAACTTTCCTCTTTCTTTATCTGTCTCCACTGAACTTCCTTTGTTTGTATTTCTAATTGTGTATTGTGTGTTGTGTGTTTCATAATTGTTCTTCTAACTGCTACATAGCCATGGCAAACCAAGCAGGAAACGGAGGTGACGGGCAAGGAGGGGTGTGGGAGATATCGGCGTCGGCGTCACCATCGTCAGCGACGGCGCCGGCGCTGGTGCTGTCGAACTCGGGGAAGAGAATAGACGAGGCGGGGAAGAAGAAGTACGTGAAGCAGGTGACGGGGCGGCACAACGACACGGAGCTGCATCTGGCGGCGCAGAGAGGGGACGTTGGAGCGGTTAGGCAGATTCTAGAGGATGTTGATTCTCAGATAATGGGTACTCTTAGTGGCGATGAGGTTGATCTTAACGCTGAGATTGCTGAGGTCCGTGCCTGTCTCGTCAACGAAGACAACGAGCTCGGCGAGACCCCTCTCTTCACTGCTGCCCAAAATGGTCATCTCCACGTCGTCAAGGAATTGCTCAACCACTCCACTCCCCTCACTCTTTCCAAGAAGAACCGTTCTGGCTTTGATCCTTTGCATATTGCTGCCAGTCACGGCCACCACCGTACTTCCTTCTTCCTTCTTCCTTCTTCCTTCTTCCTTCTATCATCACTTATCCTTCCTTACATCCTCTCTTTAATTTACTCTCCTTCCTCTCTTTTTTTTAATTACTTGCTTCCTATCATTCCCAATTTAAATAAATTAACTCTTGCTAACCCCTTCCACCCTTTGGTCTTTCATTTGCTGGACCACCCTTAA 802 0.4888 MANQAGNGGDGQGGVWEISASASPSSATAPALVLSNSGKRIDEAGKKKYVKQVTGRHNDTELHLAAQRGDVGAVRQILEDVDSQIMGTLSGDEVDLNAEIAEVRACLVNEDNELGETPLFTAAQNGHLHVVKELLNHSTPLTLSKKNRSGFDPLHIAASHGHHRTSFFLLPSSFFLLSSLILPYILSLIYSPSSLFFNYLLPIIPNLNKLTLANPFHPLVFHLLDHP 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00218 227 ProSiteProfiles Ankyrin repeat region circular profile. 114 138 - -
Pste4g00218 227 SMART ANK_2a 57 86 IPR002110 GO:0005515
Pste4g00218 227 SMART ANK_2a 114 143 IPR002110 GO:0005515
Pste4g00218 227 SMART ANK_2a 149 178 IPR002110 GO:0005515
Pste4g00218 227 Gene3D - 34 172 IPR036770 -
Pste4g00218 227 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 29 166 - -
Pste4g00218 227 FunFam Ankyrin repeat-containing protein ITN1 31 172 - -
Pste4g00218 227 ProSiteProfiles Ankyrin repeat profile. 114 146 IPR002110 GO:0005515
Pste4g00218 227 SUPERFAMILY Ankyrin repeat 55 171 IPR036770 -
Pste4g00218 227 Pfam Ankyrin repeats (3 copies) 62 170 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00218 Pste-Chr4 1815250 1816126 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00218 19 170 Miscellaneous Gene Families AT3G12360 70.588 1.45e-66 213
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01733 5 11019463 11023405 Pste4g00218 4 1815250 1816126 ECH
Pste4g00218 4 1815250 1816126 Pste4g00218 4 1815250 1816126 ECH