Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01627 GCAAGAGCCAAATAACTCACCACAACCCCTCAAATTTACGTTACAAACAAGAAAAACATCACAGTTTTGAAACACACACAAAAGAGAGATTCTTCCATTACTACACAATAGAAAAACAAACTTCAGTTGCACCTCTTGGTGTCTTTTTCAATTCTTATTCCAATTGCTAACTTTGACCCTTTCTCATCCTTCTCTCGAATCTCAATTTTGTATTGAAAGTGTAGCTTTGTTTGGAATCTGGGAAAATGGGGTTGTTTTCTGGGATTTTTCTGGGGATGGCACTCGGCGTAGCATTGATGGCTGCGTGGCAACGCATGATGTCGTACCGTAGTGCCAAGAGAATTGCAAAGGCAGTTGACATTAAACTCCTTGGATCCCTTAACAGAGATGACTTAAAGAAAATTTGTGGTGATAATTTTCCTGAATGGATATCTTTTCCTATATATGAGCAGGTGAAATGGCTCAACAAGCTGCTGTCCAAACTTTGGCCATTTGTGGCAGATGCAGCAACATTGGTGATAAGAGAATCTGTTGAACCACTATTGGAAGAGTACAGACCTCCTGGAATTACTTCATTGAAGTTCAGCAAGCTGTCCCTTGGAACTGTTGCTCCAAAAATTGAAGGTATTCGTGTTCAGAATCTTAAAAAAGGTCAAATTATAATGGACATTGATTTCCGTTGGGGTGGTGATCCCAATATTGTTTTGGCTGTTGAAGCTGCACTTGTTGCATCAATACCTATTCAGTTGAAGGATCTCCAGGTTTTCAGCATTATCCGTGTTATATTCCAACTCGCCGATGAAATTCCCTGTATTTCTGCTGTTGTTGTTGCCCTACTTGCTGAGCCAAAGCCTAGAATTGATTACACTCTGAAGGCTGTTGGTGGAAGTTTGACAGCACTTCCTGGAATTTCAGATATGATTGATGATACAGTGCACTCAATTGTTACCGATATGCTTCAATGGCCTCATAGAATTGTTGTTCCTCTTGGGGGTATACCTGTTGATACAAGCGAACTGGAGCTTAAACCCCAGGGAACCCTTAGAGTGGCTGTAATTAAAGCAAATGATCTAAAGAATATGGAAATGATTGGGAAATCTGATCCTTATGTAGTTGTGTATATTCGACCATTGTTTAAGGTTAAAACCAAGGCTATTGATAACAACTTGAATCCTGTTTGGAATGAGGTATTTGACTTGATTGCTGAGGACAAGGAGACCCAGTCACTCATTCTCGAGGTTTTTGATAAAGACATTGGGCAAGATAAGCGATTGGGAATAGTAAAATTACCACTAAACGACCTGGAACCAGAAACTGAAAAGGAGGTTGAATTGAGGCTGCTGGCATCGCTTGATACACTGAAAGTGAAAGACAAGAAGGATCGAGGGACCATAACAATAAAGATCTTTTATCACCAATTTAACAAGGAAGAACAGTTTGCTGCACTAGAAGCAGAGAAAAAGATACTAGAGGAAAGGAAGAAGCTCAAAGAGGAGGGAGTTATAGGAAGTACAATGGATGCACTAGATGGAGCAGCATCAGTAGTTGGGTCCGGTGTTGGAATGGTTGGGTCAGGTGTTGGAATGGTTGGTACCGGTGTTGCTACTGGTGTTACTACTGGTGCTGGACTTGTGGGAACTGGAATTGGTACAGGAGCTGGAATGGTTGGCAGTGGCATCGGTGCCGGAGTTGGCTTTGTTGGCAGTGGTCTTGGCGCTGTTGGTAGTGGACTGAGCAAAGCAGGAAAGTTCATGGGAAGGACAATCACAGGGCAAGGTGCATCCAGAAGAAGTGGTTCCTCTACTCCTGTTAATGTGGAGGAGGCTGGTGGTGGTGCAAAACCTCTGCATCATCATTAATACCCCTCTGCCCACTGCATGAGCAATCAAATGACCTTGCATCATTAGTTTAAAAAGCTTTCACAGTAGATATATAATATGATCTATGTTGTCTGTTCTTTTCCATATTCTGAGGCTGTTGTCAATTGCAATAGAGCGAATACCTGTAGAAATATCACTTCAATTATATACTTGTACCATTTTTTTTTTGTAATTATTTTTAACATGGACGTGTAATAAAACTTACATTGTAAAAAATCCTATATTTGGAAATCAA 2115 0.4085 MGLFSGIFLGMALGVALMAAWQRMMSYRSAKRIAKAVDIKLLGSLNRDDLKKICGDNFPEWISFPIYEQVKWLNKLLSKLWPFVADAATLVIRESVEPLLEEYRPPGITSLKFSKLSLGTVAPKIEGIRVQNLKKGQIIMDIDFRWGGDPNIVLAVEAALVASIPIQLKDLQVFSIIRVIFQLADEIPCISAVVVALLAEPKPRIDYTLKAVGGSLTALPGISDMIDDTVHSIVTDMLQWPHRIVVPLGGIPVDTSELELKPQGTLRVAVIKANDLKNMEMIGKSDPYVVVYIRPLFKVKTKAIDNNLNPVWNEVFDLIAEDKETQSLILEVFDKDIGQDKRLGIVKLPLNDLEPETEKEVELRLLASLDTLKVKDKKDRGTITIKIFYHQFNKEEQFAALEAEKKILEERKKLKEEGVIGSTMDALDGAASVVGSGVGMVGSGVGMVGTGVATGVTTGAGLVGTGIGTGAGMVGSGIGAGVGFVGSGLGAVGSGLSKAGKFMGRTITGQGASRRSGSSTPVNVEEAGGGAKPLHHH 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01627 537 Pfam C2 domain 264 361 IPR000008 -
Pste5g01627 537 Gene3D C2 domain 259 418 IPR035892 -
Pste5g01627 537 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 428 IPR045050 GO:0008289
Pste5g01627 537 CDD SMP_SYT 59 248 - -
Pste5g01627 537 PRINTS C2 domain signature 306 319 IPR000008 -
Pste5g01627 537 PRINTS C2 domain signature 328 336 IPR000008 -
Pste5g01627 537 PRINTS C2 domain signature 281 293 IPR000008 -
Pste5g01627 537 FunFam synaptotagmin-4 isoform X1 259 417 - -
Pste5g01627 537 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 264 391 IPR035892 -
Pste5g01627 537 MobiDBLite consensus disorder prediction 508 537 - -
Pste5g01627 537 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 66 249 IPR031468 GO:0008289
Pste5g01627 537 MobiDBLite consensus disorder prediction 509 523 - -
Pste5g01627 537 CDD C2 266 362 - -
Pste5g01627 537 ProSiteProfiles C2 domain profile. 247 365 IPR000008 -
Pste5g01627 537 Coils Coil 391 418 - -
Pste5g01627 537 SMART C2_3c 265 362 IPR000008 -
Pste5g01627 537 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 68 248 IPR039010 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01627 Pste-Chr5 10357470 10367884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01627 249 353 Lipid Metabolism Gene Families AT3G61300 33.962 1.71e-11 65.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01627 5 10357470 10367884 Pste6g02330 6 11307407 11319349 PCT