Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01115 ATGGTTTCTGCAAAAGAAGAGCCTGATCGCCCCATACCACCTGCTGTTGATGGTTTGTTAAGGGTTCATAAGCAAGTTATCAATGTTGACCGTGACCCTGCAGATAGCGTGTTGGCTGCTGGACGATCAGTTGTTACTAGGCTTCTAGTGGCAGATACTCAAGCAGGAAGCCTAATTGGAAAGCAGGGATCAACCATAAAATCCATTCAAGATGGGTCTGGATGCACTATACGTGTTCTTGGATCAGAAAACCTACCCGTATTTGCTTTACGAGATGATAGTATTGTTGAAATACAAGGGGAATCTGCTGGTGTTCACAAGGCAGTTGAACTTATTGCAGTTCATTTACGCAAGTTCTTGGTTGACCGCAGCATAGTTGGAGTTTTTGAAACGCAGATGCAAATGCCAGATGTTAGAGTTAACCAGAATGTGCCACCACATCAAAACTGGGGTCCTCCTCCTCAAGGGTTTCATGCTCCTGCTGGTGGCGGTGCTGGACCTGCTTTTGCACCTAATCATCAATATATGCCACCTTCACATCACTATGATAGTTATTATCCACCTACTGAGTTGCCTCCCATGGACAAGCACCTTCATCAAGGTCCACCGCCTGCCTATGCAAGGGATGCTTCTATGGGAATTCATTCATCAAGTGCACAGCCACAACAATCTGTTGTGACTAAGGTCACACAGCACATGCAAATTCCTCTTTCATATGCAGATGCTGTTATAGGAGCATCAGGCACGAATATCAGCTATATTCGTCGTGCTAGTGGAGCAAGTATTACAATTCAAGAAACAAGGGGTGTGCCAGGGGAGATGACTGTCGAGATAAGTGGAACTTCTTCTCAAATACAGGCTGCCCAGCAACTGGTTCAGAATTTCATGGCAGAAGCTGCAAATGCTACACAGGATCCTATGGGGGGATCAGTTAGCCAAGGTTACAGTGCCTATCCAACTAATGCTCCAGTTTATGCATCTCCACCCTCTAGCACCGGTGGTCATACAGGTCACGCGCCTTCTGCAGATTATGGCAACGTATATGGTACCAATTATGGGTATTAAGATGCTTCATGCATTGATTTATTTTTATTTTTGGTTCAGGAGCCGTGTAAACTGTAAACTTTGCGTTCAGTTAGTTACCGTGGGGTATATCTTCTAGGTTGATGCTGTACAAGCCTTTTTTTTCTTAATTTGTATTTTTGGCTAGTAGGTTATACTGTTGGTCCTCTTGTTTTTGCTTGGTTATTTCAGATTAATATATCATAAACA 1272 0.4379 MVSAKEEPDRPIPPAVDGLLRVHKQVINVDRDPADSVLAAGRSVVTRLLVADTQAGSLIGKQGSTIKSIQDGSGCTIRVLGSENLPVFALRDDSIVEIQGESAGVHKAVELIAVHLRKFLVDRSIVGVFETQMQMPDVRVNQNVPPHQNWGPPPQGFHAPAGGGAGPAFAPNHQYMPPSHHYDSYYPPTELPPMDKHLHQGPPPAYARDASMGIHSSSAQPQQSVVTKVTQHMQIPLSYADAVIGASGTNISYIRRASGASITIQETRGVPGEMTVEISGTSSQIQAAQQLVQNFMAEAANATQDPMGGSVSQGYSAYPTNAPVYASPPSSTGGHTGHAPSADYGNVYGTNYGY 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01115 354 CDD KH-I_PEPPER_like_rpt3 228 296 - -
Pste5g01115 354 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 2 314 - -
Pste5g01115 354 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 35 126 IPR036612 GO:0003723
Pste5g01115 354 Gene3D K Homology domain, type 1 43 119 IPR036612 GO:0003723
Pste5g01115 354 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 219 299 IPR036612 GO:0003723
Pste5g01115 354 Coils Coil 285 305 - -
Pste5g01115 354 Pfam KH domain 230 293 IPR004088 GO:0003723
Pste5g01115 354 Pfam KH domain 46 112 IPR004088 GO:0003723
Pste5g01115 354 CDD KH-I_PEPPER_rpt2_like 45 117 - -
Pste5g01115 354 ProSiteProfiles Type-1 KH domain profile. 43 112 - -
Pste5g01115 354 SMART kh_6 227 297 IPR004087 GO:0003676
Pste5g01115 354 SMART kh_6 42 117 IPR004087 GO:0003676
Pste5g01115 354 Gene3D K Homology domain, type 1 215 304 IPR036612 GO:0003723
Pste5g01115 354 ProSiteProfiles Type-1 KH domain profile. 228 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01115 Pste-Chr5 7304367 7307001 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01115 5 7304367 7307001 Pste4g01986 4 14741815 14748794 PCT