Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01986 ATACGAGTAGGTTAAAGGCGTGGAAAACAAATAAAATAAAAAGCGGTGATATCTCCGCCTCTCATCCTTTACGAAAACCTAAATTCTGCACAGCACGCAGCACCTTTCTCTACATATCCAAACGCTATCGTTTTCTGCTCTCTTCATCTTCCTAAGGTTGAGAATCATATTTCATAGCTTTTAGGATGTCTGGGGAAGTTTATGATGGACAAGACGCAGGGTATGTGCCTGAAGACCCTGAGTTTCCGCAAAACCATTCTGATGAACAGGATGGAGGAAATGTGATTGATGACTCAGGTTTTCCGCAGCTGCAGCCCGAGGAACATGATGTGGGCAATTTGGCTGAGGATGGCAATAATCCTGAAAATAATTTTGATGGGAATGATGTTGAAGGGATGTCTGGAAACCCTGATTTTCCTCCGCCAGAGCATGCTGAGGAGCAGCATGGTGAAGGAGACGTGACTGAGAATTTTGGCTCTGAGGAAAAACAGGGAGCCGAGGAGGGTGTGAAAGGCGGTGAAGTAAAGAAGTGGCCAGGCTGGCCTGGAGAGAATGTTTTTAGGATGTTGGTTCCGGTGCAGAAGGTTGGCAGTATCATTGGCCGCAAAGGCGAGTTTATTAGAAAAATTACTGAAGAGACTAAGGCTCGTATAAAAATTCTTGATGGTCCACCTGGAACTGCAGAAAGAGCTACTTTGGTGGCAAGAAGCGTTCACTCCCTGGTGATGGTTTCTGCAAAAGAAGAGCCAGATCGCAGCGTACCGCCTGCTGTGGATGGTTTGTTAAGGGTTCATAAACAAGTTGTCAATGTGGACCCTCATCCTGCTGATAGTACGTCAGGTGCAGGACGCCCAGTTGTTACAAGGCTTCTAGTGGCAGATACTCAAGCAGGAAGCTTAATTGGGAAGCAGGGGTCCACTATAAAATCCTTTCAAGATGCTACAGGTTGCAATATACGCGTTCTTGGTTCAGAACACCTGCCAGTTTTTGCTCTGCGAGATGATAGTGTTGTTGAAATACAAGGAGAATCTTCTGGGGTTCACAAGGCAGTTGAACTTGTTGCAATTCATCTACGTAAATTCTTGGTTGATCGCAGCATAGTTGGAGTATTTGAAACACAGATGCAAAGGCCTGATGTTCGAGCAAACCAGAATGTGCCACCAGGCCCTCCACACCAACCTTGGGGTCCTCCTCAAGGTTTTCCAGCTCCTGGACCTGGTAGTGTTGGTGGACCTGCCTTTCCACCCAATCCTCAGTACATGCCACCTTCCCATAACTACGATAACTACTATCCACCAGCTGACCTGCCTCCTATAGACAAGCACCTTCATCAGGGTCCAGCACCTGCCTATGGAAGAGATGCTTCTATGGCAGGAATTCATTCATCCAGTGCACAGCCACAACAATCTGTTGTGACTAAGGTTACGCAGCACATGCAAATTCCTCTGTCCTATGCAGATGCTGTTATTGGAGCATCAGGGGCAAACATCAGCTACATCCGTCGTGCTAGTGGAGCAAGTATTACAATTCAGGAGACCAGGGGTGTGCCAGGAGAGATGACTGTTGAGATAAGTGGTACTGCTTCACAAATACAGGCTGCCCAACAGCTAGTGCAGAATTTCATGGCGGAAGCTGCAAGTGCAACACAGGATCATATGGGGGGATCAATTAATCAAGGTTACAATTCATATCCTTCTAATGCTCCTGTCTACGCATCTCCGCCCTCAAGTGCTGCAGGCCACGTACCTTCTGCAGATTATGGGCCCGTTTATGGCACCAATTATGGTTATTGAGAGAACATTACATTCAATTTTAGATGAGGAGTCATATGTTTTGTAAACATTGAGCGTTCAATTTTAGTTCTTTTACTTGTTCTCGTCCTGGGCCTGTGCATGCCCTGTCTCTTATATCCCTTATATTTTCGCTGTATTACATTTGCTATATTGACTCGATAGGATTTAGAGGAAAAGAGAATTTGGTAGTTTTTCTTTTTTGCTTAACTAACTTTTTAGTCTTTTTAATATAGTTCTTGTGTTCTGAAGTTTTTTTTCCTGTTTTTGATTCGTATAAAGTATCTTCTATCACGTTTTTAAGAGATTTTAGTCATTGACGTACTTGTAAAAAAAATAGGTGATATACTTGTGAAACATTTTATGTTGTC 2161 0.4419 MSGEVYDGQDAGYVPEDPEFPQNHSDEQDGGNVIDDSGFPQLQPEEHDVGNLAEDGNNPENNFDGNDVEGMSGNPDFPPPEHAEEQHGEGDVTENFGSEEKQGAEEGVKGGEVKKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIRKITEETKARIKILDGPPGTAERATLVARSVHSLVMVSAKEEPDRSVPPAVDGLLRVHKQVVNVDPHPADSTSGAGRPVVTRLLVADTQAGSLIGKQGSTIKSFQDATGCNIRVLGSEHLPVFALRDDSVVEIQGESSGVHKAVELVAIHLRKFLVDRSIVGVFETQMQRPDVRANQNVPPGPPHQPWGPPQGFPAPGPGSVGGPAFPPNPQYMPPSHNYDNYYPPADLPPIDKHLHQGPAPAYGRDASMAGIHSSSAQPQQSVVTKVTQHMQIPLSYADAVIGASGANISYIRRASGASITIQETRGVPGEMTVEISGTASQIQAAQQLVQNFMAEAASATQDHMGGSINQGYNSYPSNAPVYASPPSSAAGHVPSADYGPVYGTNYGY 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01986 535 MobiDBLite consensus disorder prediction 318 356 - -
Pste4g01986 535 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 403 483 IPR036612 GO:0003723
Pste4g01986 535 CDD KH-I_PEPPER_rpt2_like 225 297 - -
Pste4g01986 535 Gene3D - 122 300 - -
Pste4g01986 535 Gene3D K Homology domain, type 1 399 488 IPR036612 GO:0003723
Pste4g01986 535 CDD KH-I_PEPPER_rpt1_like 122 200 - -
Pste4g01986 535 CDD KH-I_PEPPER_like_rpt3 412 480 - -
Pste4g01986 535 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 114 169 IPR036612 GO:0003723
Pste4g01986 535 MobiDBLite consensus disorder prediction 80 95 - -
Pste4g01986 535 Pfam KH domain 226 292 IPR004088 GO:0003723
Pste4g01986 535 Pfam KH domain 125 164 IPR004088 GO:0003723
Pste4g01986 535 Pfam KH domain 414 477 IPR004088 GO:0003723
Pste4g01986 535 SMART kh_6 411 481 IPR004087 GO:0003676
Pste4g01986 535 SMART kh_6 121 181 IPR004087 GO:0003676
Pste4g01986 535 SMART kh_6 222 297 IPR004087 GO:0003676
Pste4g01986 535 Coils Coil 469 489 - -
Pste4g01986 535 ProSiteProfiles Type-1 KH domain profile. 223 292 - -
Pste4g01986 535 MobiDBLite consensus disorder prediction 1 95 - -
Pste4g01986 535 MobiDBLite consensus disorder prediction 322 356 - -
Pste4g01986 535 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 114 504 - -
Pste4g01986 535 ProSiteProfiles Type-1 KH domain profile. 122 158 - -
Pste4g01986 535 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 216 305 IPR036612 GO:0003723
Pste4g01986 535 ProSiteProfiles Type-1 KH domain profile. 412 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01986 Pste-Chr4 14741815 14748794 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01115 5 7304367 7307001 Pste4g01986 4 14741815 14748794 PCT