Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g01089 GTATTTTTTAAAAAGGGATAAAAGAGAGAGAAAATAAATCAAGGCAAGCTCACGGAAGGGGCGAACATGGATCATGAAGCTGCTTCCAGTTTCGCTTTCTCTCTCTAAAAAACGCAAACGGTAAAAGCCAATAGCTGAAACCCTACCCTCTGTTTGTGTCTGTCCTGTATATTATTGTTGCTTCTCTTCCACGCATCGAATTCAATTCTCTGCGATCTGAATCCGTGAAATCAATGTGCCTCTTTCGGAATCGCAGAGCGACCAAAGCTTTCGTCGTTGTCCACCGGTGACTGCCATCATCGATGAGGTCATCGCATCGGTGGCAGAGGATTCTGATCCTCGCTCTTCTCTCTCTCTCCGTCGTTGCTCCGCTCGTTTTCTTCTCTAGCCGGCTTAAAACTCTCACTCCCGACAGACCTCAGGACTTTCTTGATGATTTTTCGAGTGTTACATATAGGTCAGATGCTTTAAAGCTAAATGCTATTGAACAGGAAGGTGCTGAAGAATTAGAAGAGCCCAAGGAAGTTGTTTATAAGCAAAAAGATTTTGATTCAACATATAGTTACGTTTCGCAAAAGAATAATGGTTCTGAGGAATCTAAAAATGATGGGTACAGAAATAACGATTTGGAAAGAAATGTTTCAGAACTCAACCTGGACAATAGACATGACCTGGAAGCTCAGCAGAAACGATTATTCTCCATTGAAGGGGATAAGAATATATTTAATACAACAGTTACACACAATCAGAACATACATACTCAACCTCAAAGGACAGATGTGAAAATTGAAGTGACAAATAAGAAATCTGGTCCAAAACCAACCCAACATCATCAGAGTTCACATCCTCAGTCTCGTAGAGTATCAAATCAAAAGGTTTTGGAGATTAGGGATCAAATTATTAGAGCCAGAGCATACTTGGGCTTTCCTCCTCCAGGCAGCAACTCACATTTGGTGAAGGAGTTAAAGCTGAGAATTAGAGAGTTGGCACGTGCAGTTGGAGAAGCTACTAAGGATTCAGATTTGTCAAGGAGTGCTTTGCAGAAAATGAGACACATGGAGGCTTCACTGTCTAAAGCCAACCGTGCTTTCCCAGACTGCACTGCTATGGCTACTAAGCTTCGTGCAATGAATCATAATGCTGAAGAGAAAATTCATTATCATCAAAACGAAGCAACATATCTTGTTCATCTTGCTGCAAGGACCACCTCAAAAGGTCTTCATTGTCTTTCTATGCAGCTAACTGCTGATTACTTTGCCCTGACACCAGAGGACCAAAAGCTTCCAAATGAAAATAAGATTCATGATCCAAAACTTCATCATTACGCTGTCTTCTCTGACAATGTTCTAGCATGTGCCGTGGTTGTTAACTCCACTGTCTCTAATGCCAAGAAACAGGAGAAACTTGTCTTCCATGTAGTGACCAATTCACTCAACCTTCCTGCAATCTGGATGTGGTTCTTATTAAACCCTCCTGGCAAAGCCACAGTCCACATACAAAGCATAGAGAACTTTGAATGGTTTCCCAAGTACAATACATTCAACAACCATAATTCCAGTGATCCAAGATATACTTCTGAGTTGAACTACCTGCGTTTCTATCTGCCAGATATATTCCCTACTTTAAATAAGATTCTTCTCTTTGATCATGATGTGGTGGTGCAACAAGATCTCGGTGGACTATGGAATGCCAATATTAAAGGAAAAGTAATTGCAGCAGTAAGCACTTGTCAGGAAGGTGAAACCTCATTTCATAGGATGGACATGTTCATAAACTTCTCAGATCCATTCATTGCAAAGAGGTTTGATGTCAATGCTTGCACGTGGGCATTTGGGATGAACTTGTTTGATTTACAACAGTGGAGGAGACATAATTTAACTGCTCTTTATCACAGATATTTGCAAATGGGTTCCAACAGGCCATTGTGGAACGTTGGAAGCCTACCTTTAGGCTGGCTCACTTTCTATAACAAGACTATGATGTTGGAAAGACGATGGCACATTCTGGGCCTTGGATATGACTCTCGTGTCGATAGAAACGAGATTGAGCAGGCTGCCGTTATTCACTTCGATGGGATAAGGAAGCCGTGGTTGGATATTGCAATGGGAAGATATAGAAGTTACTGGACCAAATATATAAATTTTGAACAGCCTATTTTGCAACGTTGCAATCTCCAGATGTAGCCCAAGATTATAATATCACCCTACCTGGCGGGATGTATTTGACTAATTTGCTGGCACATTAATTGCCTGCTTCAATCCATTCTTTATTGTTCTTGGCAATTCTTCTTGTAAAGCCCTTTCATAGCTCCATAGAAATTTCTACATAAATCTTTAGAGGCTTAGCCAATTTGTAGTGAAATTGATGTGAAATAAGACTCAGGCGTTTTAGCTGCTCGGAGAGATGCTATTGATTGCTGTGTACATAATTCATTTTCCTGCCCTATTAGGTCGTATTTCCCTGTTTACCATCAACTTGCACCAATTACGTGCGGACTGGAAATTAAAGTTAAACATTACTTTGAGGAATTAATTTATACACAACTATGGAAATGGCGGCTGCGATTTGTGTTGTAACGTTAATTATGTCGGATGATAATTTTTCCTGTTATATGAAGCTAGCATCCAGAGGGATTCGTGTGATGCTCGCTTCTTCACACTTTTGTCTTCAAAAATGTAATGCAATTTCTTTATTATCCGTG 2701 0.4043 MRSSHRWQRILILALLSLSVVAPLVFFSSRLKTLTPDRPQDFLDDFSSVTYRSDALKLNAIEQEGAEELEEPKEVVYKQKDFDSTYSYVSQKNNGSEESKNDGYRNNDLERNVSELNLDNRHDLEAQQKRLFSIEGDKNIFNTTVTHNQNIHTQPQRTDVKIEVTNKKSGPKPTQHHQSSHPQSRRVSNQKVLEIRDQIIRARAYLGFPPPGSNSHLVKELKLRIRELARAVGEATKDSDLSRSALQKMRHMEASLSKANRAFPDCTAMATKLRAMNHNAEEKIHYHQNEATYLVHLAARTTSKGLHCLSMQLTADYFALTPEDQKLPNENKIHDPKLHHYAVFSDNVLACAVVVNSTVSNAKKQEKLVFHVVTNSLNLPAIWMWFLLNPPGKATVHIQSIENFEWFPKYNTFNNHNSSDPRYTSELNYLRFYLPDIFPTLNKILLFDHDVVVQQDLGGLWNANIKGKVIAAVSTCQEGETSFHRMDMFINFSDPFIAKRFDVNACTWAFGMNLFDLQQWRRHNLTALYHRYLQMGSNRPLWNVGSLPLGWLTFYNKTMMLERRWHILGLGYDSRVDRNEIEQAAVIHFDGIRKPWLDIAMGRYRSYWTKYINFEQPILQRCNLQM 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g01089 626 Pfam Glycosyl transferase family 8 308 600 IPR002495 GO:0016757
Pste5g01089 626 MobiDBLite consensus disorder prediction 168 188 - -
Pste5g01089 626 SUPERFAMILY Nucleotide-diphospho-sugar transferases 340 623 IPR029044 -
Pste5g01089 626 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 414 624 IPR029993 GO:0047262
Pste5g01089 626 Coils Coil 218 238 - -
Pste5g01089 626 MobiDBLite consensus disorder prediction 166 188 - -
Pste5g01089 626 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 313 616 IPR029044 -
Pste5g01089 626 MobiDBLite consensus disorder prediction 88 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g01089 Pste-Chr5 7152802 7162415 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g01089 1 625 Glycosyltransferase AT1G06780 47.812 0.0 615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01089 5 7152802 7162415 Pste4g02040 4 14958310 14966845 PCT