Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00851 TATAATTTGCCGGTCTAGCTCTGTTACGAGGTATCACATCGATGGCAGATCACTCAAACTTCGGCGGTCGCGGTGGAGTTCGAGTGGTGGTCGCCGGCGACCGCGCCACCGGAAAATCGAGCCTGATAGCTGCCATAGCGACAGAGTCATTCGCAGAGTCCGTTCCACCGGTTCTTCCGCCCACTCTCTTGCCCCCTGATTTGTACCCTGACAACGTTCCTCTCACCATCATCGACACGCCTTCCAGTTTGGACAAACAAAGCAAGCTTAATGAGGAGTTGAGAGGAGCTGATGTCGTGGTTTTGAGCTATGCTTGCAACGATAGGACGTCGTTTCCTCGGTTGAGTTCTTACTGGTTCCCGGAACTGCAGAGGTTGGAGGTGCAGGCACCTGTAATTGTGGTTGGTTGCAAGCTGGATCTTAGGGATGAAAGCCAGCATGTGAGCTTGGAGCACCTCATGACACAGCTTCTGCAACAGTTCAAGCAAATTGTCACCTGCATTGAATGCTCTGCCGTCACGCAATACCAGGTCCCTGAAGTTTTTTATTTTGCCCAAAAAGCGGTACTATATCCAGTAGATCCTTTGTATGATCATGAAAGTCAAGCTTTAAGGGATCGATGTGTTAGGGCATTGAGAAGAATCTTTGTTCTTTGTGATCGTGACATGGATGAAGCCCTCAATGATGCAGAACTAAATGAGTTTCAGGTTAGATGTTTCAATGCTCAATTGCAATCATCTGAAATAGCAGGAATCAAAACAATTGTACAGCAGAAAGTACCTGAAGGAGTCAACTCACTTGGTCTTACTTTTCCTGGATTCATTTATGTCCATAATATGTTCCTTAAAAAGGGGCGTCCAGAGACACTATGGTCTGTTCTAAGAAACTTTGGATATGATAATAATTTGAAACTCAAGGATGATTTCCTTCCTGTTCCATCTAAGCGAGCTTTGGATCAGGATCGAGCCCTACGACCTGCTGAAGTTGATAAGTTATTTTGTACTGCTCCAGAAAGTCCATGGAATGATGCTCTATATAAGGATGCTGCTGAGAGAACTGAAATGGGTTACATATCTCTTAATGGATTCCTGTCACAGTGGGCCCTTATGACATTACTTGATCCACCATGTAGCCTGGCTAATTTGATTTACATTGGATATAGTGGAAATCCTGCTGCAGCTCTCCGTGTTACTCGTAGAAGAGCAGTAGATTGCAAAAAGCAAGCAACAGAAAGGAATGTGTTCCAGTGCTATGTTTTTGGTTCTAAAAATGCTGGGAAGTCTGCTCTGTTAGATTCATTATTGGGAAGGCCCTTCTCAAAGAATTATACTCCAACCACAGTTGAGAGGTTTGCAGTAAATGCCATTGAATTAATAGGGGGTACAAGAAAGACTCTTGTGTTACGAGAGATACCAGAGAGTCAAGTATCGAATCTTTTGTCAAATAAGGATTCTTTGGCTGCATGTGATATAGCTGTTTTTGTGCATGACAGCTCAGATGAACATTCATGGAAGAAATCCAGAGATTTGCTTGAGAAGGTTGCTAGACAAGGAGATCTAGCGGGTTATAGAGTTCCTTGTCTCCTTATTGCTGCTAAGGATGATTTAACTCCATATCCGAGGGCAGTACAAGATTCAGTTAAGGTTACTCAGGAACTGGGAATAGAGGCTCCTATTCATCTAAGTATGAAATTAGGCGATTCAAGTAATGTATACTATAAAATTGTCAATGCTGCAGAGCACCCTCATTTAAGCATTCCTGAAACTGAGATTGGGAGGAAAAGAAAGCAATTCCATCGGCTTCTTCAGCACTCTCTTGTTTTTGCCTCAGTTGGGACTGCTATGGCAGTTGTTGGGTTGGCAGCATGTCGTGCATATGCAGTTAAAAGGAATTCTTCTCGTTAGTCACAACTTCACAAGAAATGATGCTGACAAGCTGACTTAAATTAATGTTCAGTATTGGACCCACTAATCTTGGTAAGCTTCACTTAGAATATAATTTTTGTATAGTGCTACTAATTTCATTTATTTAGTGCTACAACGGCTTCTTTATAGCCACCAAAAAAATATGATCGTGGTCTGTTTCTGTTTTCTAATTGATTTACATTGTGTATATTTCGTGGTTAAATTACATTTCATTTGATGTAATTACACTAGTGTCTCTTTTGGAGTATGCTTGGAATTAAATATTTCAGGTACTTATTTGATTTGTAAACTATAAAATAATTTAATCTTG 2235 0.4152 MADHSNFGGRGGVRVVVAGDRATGKSSLIAAIATESFAESVPPVLPPTLLPPDLYPDNVPLTIIDTPSSLDKQSKLNEELRGADVVVLSYACNDRTSFPRLSSYWFPELQRLEVQAPVIVVGCKLDLRDESQHVSLEHLMTQLLQQFKQIVTCIECSAVTQYQVPEVFYFAQKAVLYPVDPLYDHESQALRDRCVRALRRIFVLCDRDMDEALNDAELNEFQVRCFNAQLQSSEIAGIKTIVQQKVPEGVNSLGLTFPGFIYVHNMFLKKGRPETLWSVLRNFGYDNNLKLKDDFLPVPSKRALDQDRALRPAEVDKLFCTAPESPWNDALYKDAAERTEMGYISLNGFLSQWALMTLLDPPCSLANLIYIGYSGNPAAALRVTRRRAVDCKKQATERNVFQCYVFGSKNAGKSALLDSLLGRPFSKNYTPTTVERFAVNAIELIGGTRKTLVLREIPESQVSNLLSNKDSLAACDIAVFVHDSSDEHSWKKSRDLLEKVARQGDLAGYRVPCLLIAAKDDLTPYPRAVQDSVKVTQELGIEAPIHLSMKLGDSSNVYYKIVNAAEHPHLSIPETEIGRKRKQFHRLLQHSLVFASVGTAMAVVGLAACRAYAVKRNSSR 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00851 620 Gene3D - 464 565 IPR027417 -
Pste5g00851 620 PIRSF Miro 9 305 IPR021181 GO:0003924|GO:0005509|GO:0005525|GO:0005741|GO:0007005
Pste5g00851 620 PIRSF Miro 301 620 IPR021181 GO:0003924|GO:0005509|GO:0005525|GO:0005741|GO:0007005
Pste5g00851 620 Gene3D - 185 289 - -
Pste5g00851 620 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 209 IPR027417 -
Pste5g00851 620 FunFam Mitochondrial Rho GTPase 10 180 - -
Pste5g00851 620 Pfam Ras family 14 175 IPR001806 GO:0003924|GO:0005525
Pste5g00851 620 Pfam Ras family 405 530 IPR001806 GO:0003924|GO:0005525
Pste5g00851 620 SUPERFAMILY EF-hand 181 354 IPR011992 -
Pste5g00851 620 Gene3D - 300 458 - -
Pste5g00851 620 SMART rho_sub_3 15 178 IPR001806 GO:0003924|GO:0005525
Pste5g00851 620 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 397 571 IPR027417 -
Pste5g00851 620 SMART rab_sub_5 13 178 - -
Pste5g00851 620 ProSiteProfiles Miro domain profile. 398 567 IPR020860 GO:0003924|GO:0005525
Pste5g00851 620 FunFam Mitochondrial Rho GTPase 465 566 - -
Pste5g00851 620 Pfam EF hand associated 327 394 IPR013566 -
Pste5g00851 620 Gene3D - 11 180 IPR027417 -
Pste5g00851 620 PRINTS Transforming protein P21 ras signature 153 175 - -
Pste5g00851 620 PRINTS Transforming protein P21 ras signature 13 34 - -
Pste5g00851 620 PRINTS Transforming protein P21 ras signature 114 127 - -
Pste5g00851 620 ProSiteProfiles Miro domain profile. 10 177 IPR020860 GO:0003924|GO:0005525
Pste5g00851 620 Pfam EF hand associated 229 299 IPR013567 -
Pste5g00851 620 PANTHER RHO FAMILY GTPASE 13 188 IPR003578 GO:0005525|GO:0007264
Pste5g00851 620 CDD Miro2 397 576 - -
Pste5g00851 620 SMART ras_sub_4 14 178 - -
Pste5g00851 620 FunFam Mitochondrial Rho GTPase 185 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00851 Pste-Chr5 5393791 5403495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00851 1 618 EF-hand Containing Proteins AT3G63150 56.006 0.0 760
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00851 5 5393791 5403495 Pste4g02212 4 16061141 16068600 PCT