Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00535 ATGTCTTGTGCAGGTTGTGTGAAGATGGGAGTTGGTGGCCGAGCAACCGTTACTCCAGCCAGCAGGAAGCCAGAGGCTGACCCTTTGAAGCGGGTGCCATTTGAAAAGCCTCCATTTAGTCTCAGCATCAAGAAGGCCATTCCACCTCACTGTTTCCAGCGCTCTGTTCTCCACTCATTCTCTTATGTCGTTTATGATCTCACCATAGCCTTCTGCCTCTATTATGTTGCCACCCATTTCTTCCACCACCTTCCTGGTCCTCTCTCTTTCGTGGCATGGCCAATCTACTGGGTACTCCAAGGTTGCGCCTCTACTAGTGTTTGGGTCATTGCTCATGAGTGTGGCCACCAAGCATTCAGTGATTACCAGCTGCTTGATGATATCGTTGGCCTTGTTCTCCACTCTGCTCTCCTAGTCCCATACTTTTCATGGAAATACAGCCATCGCCGTCACCACTCTAACACTGGTTCTCTGGAGAGGGATGAAGTACATGTGCCAAAGCAGAAGTCTGCTATGAAATGGTACTCTAAATACCTTAACAATCCACCAGGCAGGGTCCTCACATTTGTTGTTGCCCTCACACTTGGTTGGCCCATGTACTTGGCTTTTAATGTTTCAGGCAGGCCTTATGAAAGGAGTTCTTGCAGTATGTTATGGCCTTTTCCATCTTATCATGGGAAAGGGCTTGCCTGGGTGGTGTGTGTCTATGGAGTTCCGTTGCTTGTTGTCAATGGAATTTTGGTGTTTGCTACATTCTTGCAGCATACACACCCTGCATTGCCACACTACAGTTCTTCTGAGTGGGACTGGTTGAGAGGAGCTTTATCAACCGTGGATAGAGATTATGGAATCCTGAACAAGGTCTTCCATAATATCACGGACACTCATGTGGCACATCACTTGTTCTCCACAATTCCACATTATCATGCAATGGAGGCTACTGATGCAATAAAGCCTATTTTGGGAGAGTATTATCTTTTTGACCAGACTCCAATTTTCAAGGCAATCTGGAGAGAGGCAAGAGAGTGTATTTATGTGGAGCCAGATCAAAGTACTAAGAGCAGAGGTGTATTTTGGTACAACAATAAGTTGTGA 1095 0.4639 MSCAGCVKMGVGGRATVTPASRKPEADPLKRVPFEKPPFSLSIKKAIPPHCFQRSVLHSFSYVVYDLTIAFCLYYVATHFFHHLPGPLSFVAWPIYWVLQGCASTSVWVIAHECGHQAFSDYQLLDDIVGLVLHSALLVPYFSWKYSHRRHHSNTGSLERDEVHVPKQKSAMKWYSKYLNNPPGRVLTFVVALTLGWPMYLAFNVSGRPYERSSCSMLWPFPSYHGKGLAWVVCVYGVPLLVVNGILVFATFLQHTHPALPHYSSSEWDWLRGALSTVDRDYGILNKVFHNITDTHVAHHLFSTIPHYHAMEATDAIKPILGEYYLFDQTPIFKAIWREARECIYVEPDQSTKSRGVFWYNNKL 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00535 364 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 24 215 IPR012171 GO:0016491
Pste5g00535 364 CDD Delta12-FADS-like 54 310 - -
Pste5g00535 364 Pfam Fatty acid desaturase 92 327 IPR005804 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00535 Pste-Chr5 3497623 3498794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00535 9 364 Lipid Metabolism Gene Families AT3G12120 65.274 0.0 523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00535 5 3497623 3498794 Pste5g00535 5 3497623 3498794 ECH
Pste5g00535 5 3497623 3498794 Pste4g02907 4 20521512 20527729 PCT