Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00142 TTCATTTTTTGGTCAGAAATTTGGCATAGACCCAAATTAATGTTCAGCTTTGGTCAAGCAACACCCACAAAAAAAAATTGATTTCCCATTGCAGCAAGTAAAAAAAAAAAAATATTCATTGGTCGGTAAGGGGAAAGTGAGAAGCATAAGATTGAGGCAGGTTATATAGGAGTCTCAGTTTTAGTTTATAGGCACACATCTATTGAAGTTCATAACTCATCCTTAGGTGGTTTTATCAAACACTTCTTTAGCCTTTTAGAGCATGGTTGGAAGCATTATGGGAGTGGTTCATAATGCATACTCAAATGGAAGTGTTGGTGTTCAAAATTGTAATGGGGTGGAGGAGAAGCTTGATTGCTTGAGGAGGCTAATTGGAAAGGCTGATGGTGACCCTTTGAGAATTGTGAGTGTTGGAGCTGGTGCTTGGGGAAGTGTTTTTGCAGCTTTGCTGCAAGATACTTATGGTCAATTTAGGGACAAGATACAGATCAGGATATGGAGAAGAGCAGGAAGGGCAGTGGATAGAGGCACTGCTGAGCATCTCTTTGAAGTCATCAATTCAAGAGAGGATGTGTTGAGAAGGTTGATCCGGCGTTGTGCTTATCTCAAATATGTTGAGGCAAGGCTTGGTGATAGAACCCTCTATGCTGATGAGATTCTCAAAGATGGTTTTTGCTTGAACATGATTGATACCCCACTTTGTCCTTTGAAGGTTGTCACAAACTTGCAGGAAGCTGTTTGGGATGCTGATATTGTGGTCAATGGTTTGCCTTCAACAGAAACTCGTGAGATATTTGAAGAGATAAGTAAGTATTGGAAGGAGAGGATTACTGTGCCTATAATTATCTCTTTGTCAAAGGGTATAGAGGCTGCATTGGAGCCTGTTCCCCACATTATCACTCCCACAAAGATGATTAACCAAGCAACTGGAGTGCCTATGGAGAACATACTCTATCTTGGGGGTCCAAATATTGCCTCAGAAATCTACAACAAAGAGTATGCCAATGCAAGAATATGCGGAGCTGAGAAATGGAGGAAACCTCTGGCAAAGTTTTTACGACAACCACACTTCATTGTCTGGGATAACAGTGACCTTGTCACCCACGAGGTCATGGGTGGTTTGAAAAATGTCTATGCAATTGGAGCTGGAATGGTAGCTGCCCTTACCAATGAGAGTGCTACAAGCAAATCTGTGTACTTTGCACACTGCACTTCGGAAATGATATTTATCACTCACTTGTTGACTGAAGAACCTGAAAAACTTGCAGGGCCATTACTGGCTGACACTTATGTGACCTTGTTAAAAGGTCGTAATGCTTGGTATGGCAAGATGTTAGCTAAGGGACAATTAAGACCAGACATGGGTGACAGCATCAGTGGCAAAGGAATGATTCAGGGTGTGTCTGCAGTGAAGGCATTCTTTGAACTTCTGAGCCAATCCAGCTTGAATGTATTGCATCCTGAAGAAAACAAGCCTGTTGCTCCTGTAGAGCTCTGCCCTATCTTGAAGACACTGTACAAAATTTTGATATCAAGAGAACAGTCATCACAAGCTATTCTGAAAGCCTTGAGGGATGAAAATCTGAATGATCCTCGCGAACGAATTGCAATAGCACAAAGCCATGTTTTCTACAAGCCTTCACTTCTTGGAAAACCCTGATTGTTTTCTCTTTGGCAAAAGCCAATGTGGATGCAATGATATATATGAATCAATTGGCAAAGGGAATACTTTAATGAGGATGAATTGAACGTAGTATTGTTTTGTGATGAATTTTGTATTACATTATTGTATGTATATATGTCAAAACTCAAGATATGAGCCACTAAGCAATCAAGTTGATAACTCCCAAAAACAC 1856 0.4068 MVGSIMGVVHNAYSNGSVGVQNCNGVEEKLDCLRRLIGKADGDPLRIVSVGAGAWGSVFAALLQDTYGQFRDKIQIRIWRRAGRAVDRGTAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLYADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISKYWKERITVPIIISLSKGIEAALEPVPHIITPTKMINQATGVPMENILYLGGPNIASEIYNKEYANARICGAEKWRKPLAKFLRQPHFIVWDNSDLVTHEVMGGLKNVYAIGAGMVAALTNESATSKSVYFAHCTSEMIFITHLLTEEPEKLAGPLLADTYVTLLKGRNAWYGKMLAKGQLRPDMGDSISGKGMIQGVSAVKAFFELLSQSSLNVLHPEENKPVAPVELCPILKTLYKILISREQSSQAILKALRDENLNDPRERIAIAQSHVFYKPSLLGKP 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00142 465 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE 43 439 - -
Pste5g00142 465 Gene3D - 139 273 - -
Pste5g00142 465 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 277 432 IPR008927 -
Pste5g00142 465 FunFam Glycerol-3-phosphate dehydrogenase [NAD(+)] 27 108 - -
Pste5g00142 465 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 277 431 IPR006109 GO:0005975|GO:0047952
Pste5g00142 465 FunFam Glycerol-3-phosphate dehydrogenase [NAD(+)] 277 437 - -
Pste5g00142 465 Gene3D - 27 108 - -
Pste5g00142 465 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 149 251 IPR011128 GO:0016616|GO:0046168|GO:0051287
Pste5g00142 465 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 45 277 IPR036291 -
Pste5g00142 465 Gene3D - 277 437 IPR013328 GO:0016491
Pste5g00142 465 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 49 66 IPR006168 GO:0006072|GO:0009331|GO:0047952
Pste5g00142 465 PRINTS NAD-dependent glycerol-3-phosphate dehydrogenase signature 270 294 IPR006168 GO:0006072|GO:0009331|GO:0047952
Pste5g00142 465 FunFam Glycerol-3-phosphate dehydrogenase [NAD(+)] 139 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00142 Pste-Chr5 1066183 1070186 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00142 1 465 Acyl Lipid Metabolism Gene Families AT2G41540 87.097 0.0 814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00142 5 1066183 1070186 Pste5g00142 5 1066183 1070186 ECH
Pste5g00142 5 1066183 1070186 Pste4g03149 4 23056008 23068909 PCT