Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03149 CTCTTTTCTCTTTCTATCTATGGCATAACCAGTGAGAACAAGCTGCTTCTAGATTCAGTTTTGTTAGTATTTTTTACTTTATATGCTCTACTTCATGCACATTTCAGTGCAACATAATTTCTCACATAATTTTCTTTTAATTTTTTTGTATCTTGTGATTTAGCTTTATTTCCTTAATCCCTTCAACAAGGTGGCTATTGCATTTAAACATAATATTTTGGACATTTGGTACTAAGGAATCAACCCTTTGGTTGAATAAACTTAACTTTGTAGTTCCCACACAAAAGCTAAGGTTTTTATGTGTTGTATTTTTTTTTTACTAGTTCTGGCTGTGTTTTTTAGCTGGGTAGATGAACAACTCTAGACGGAGAAAGCAAAGTTACATCAGTTTTTGAGTTTTATAGTTTGTTTTTTTCTTCTGGTCTTTTGGCATGTGCGGTTCTGAGAAAGCCAGAAAAGGTACACATTATTGTTTGTAATGGTATGACATATTTCATGCAATAATCTGTTTCAACTAAAGTTCGGAGTGGGAGAAGCTTTCTGTCAGAAAATCTGAAAAGGAAGACCTGAATTATTAGTTAGTTCAGTTTTTGGTCCAGCAAGATCCACAAAAAAGATTTGATTTTGAAGTTCATTTTACATCTTATTGGTAACACAAACCTCTGATCAGAAGAGTCAAATTCGGTAGTTAGAGTTGGAGGAATGAGAAAAAGGCCAAAGTTTTAGGGGGGTCATATAGGAGTGTTGAGTGATGTGTCTAGTTTATTTAAAGGCATAAACCCTGGATTAGAAAGGACTCATTTATTGACAAGTCTTAGAACTAGAAGCAAATAAAGCATTCAAGGTTTCATCTCAAGGCTTGTTGGGTTTATGCATGGTGGGAAGCATCATGGGAGTAGTTAGTAATGAATACTCAAATGGATCTGTTCAGGGCTGCAATGGTTTAGAGGAGAAGCTCGATGAACTTCGAGGCCTTGTTGGTAAGGCTGATGGTGATCCTTTGAGAATTGTGAGTGTTGGTGCTGGTGCTTGGGGCAGTGTTTTTGCTGCTTTGCTGCAAGATTCTTATGGCCAATTTCGCGATAAGGTGCAAATCAGGATATGGAGAAGGCCAGGAAAGACAGTTGATAGAGCCACTGCTGAGCACCTCTTTGAAGTTATCAACTCAAGGGAGGATGTGCTGAGGAGGTTGATCAGGCGCTGCGCGTATCTGAAATATGTTGAGGCCAGGCTTGGAGACAGGACTCTTCTGGCTGATGAAATTCTGAAAGATGGATTTTGCTTGAATATGATTGACACACCACTTTGTCCATTGAAGGTGGTCACAAACTTGCAGGAAGCTGTTTGGGATGCTGATATTGTGGTTAATGGTTTGCCTTCAACCGAAACTCGCGAGATTTTTGAAGAGATTAGTAAATATTGGAAGGAGAGAATCACAGTGCCTGTGATAATCTCTTTGGCAAAGGGTATAGAGGCTGCATTGGAGCCTGTTCCTCATATTATAACCCCCACAAAAATGATTAACCAAGCAACTGGAGTACCAATAGAGAACATACTTTATCTTGGTGGTCCAAATATTGCCTCAGAAATCTACAACAAGGAGTATGCCAATGCTCGAATATGCGGAGCAGAGAAATGGAGGAAACATCTTGCAAAGTTTCTACGACAACCACATTTTATTGTCTGGGACAACAGCGACCTTGTCACACATGAGATCATGGGAATGGTAGCAGCCCTTACCAATGAGAGTGCAACTAGCAAATCTGTATACTTTGCACACTGCACATCAGAGATGATATTTATCACTCATTTGTTGGCTGAAGAACCTGAGAAACTTGCAGGGCCATTATTGGCTGACACTTATGTGACATTACTAAAAGGTCGTAACGCGTGGTATGGCCAGATGTTAGCTAAGGGTGAATTAAGCCCTGACATGGGTGACAACTTCAGTGGCAAAGGAATGATTCAGGGTGTCTCAGCAGTGGAGGCATTCTTTGAACTTTTGAGTCATTCAAGCCTGAATGTGTTGCACCCTGAAGAAAACAAGCCGGTTGCTCCTGTTGAACTCTGTCCCATCTTGAAGACACTGTATAAAATATTGATATCCAGGGAACAACAGTCATCAGAAGCTATCCTCCAAGCTCTTAGGGATGAAAATCTGAATGATCCCCGTGAACGCATCAAGATTGCACAAACTCATGCTTTCTACATGCCTTCACTACTTGGACAATCCTGATTATTTTGTCTTGCTAAAATATATTATACATAGTGGAGCATCTGTCAAGGTTTTTCTTTTATGCATACAATTTTATGATTTTTTTTATGGCATAGAACTTATAAGTTTATGATGGACTTTGCAATTCATACATTTTGTGTCAAGTGGCAGATGTACGTATGTGATGGTATCATTCCCTCATTTTGGAAAGATCCCAAGTATAGTAAATGTTAATATTTTCC 2457 0.3907 MVGSIMGVVSNEYSNGSVQGCNGLEEKLDELRGLVGKADGDPLRIVSVGAGAWGSVFAALLQDSYGQFRDKVQIRIWRRPGKTVDRATAEHLFEVINSREDVLRRLIRRCAYLKYVEARLGDRTLLADEILKDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVVNGLPSTETREIFEEISKYWKERITVPVIISLAKGIEAALEPVPHIITPTKMINQATGVPIENILYLGGPNIASEIYNKEYANARICGAEKWRKHLAKFLRQPHFIVWDNSDLVTHEIMGMVAALTNESATSKSVYFAHCTSEMIFITHLLAEEPEKLAGPLLADTYVTLLKGRNAWYGQMLAKGELSPDMGDNFSGKGMIQGVSAVEAFFELLSHSSLNVLHPEENKPVAPVELCPILKTLYKILISREQQSSEAILQALRDENLNDPRERIKIAQTHAFYMPSLLGQS 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03149 453 Gene3D - 135 271 - -
Pste4g03149 453 Gene3D - 280 425 IPR013328 GO:0016491
Pste4g03149 453 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 43 275 IPR036291 -
Pste4g03149 453 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 282 412 IPR008927 -
Pste4g03149 453 FunFam Glycerol-3-phosphate dehydrogenase [NAD(+)] 137 271 - -
Pste4g03149 453 Gene3D - 26 106 - -
Pste4g03149 453 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 282 414 IPR006109 GO:0005975|GO:0047952
Pste4g03149 453 FunFam Glycerol-3-phosphate dehydrogenase [NAD(+)] 275 425 - -
Pste4g03149 453 FunFam Glycerol-3-phosphate dehydrogenase [NAD(+)] 25 106 - -
Pste4g03149 453 Pfam NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 147 249 IPR011128 GO:0016616|GO:0046168|GO:0051287
Pste4g03149 453 PANTHER GLYCEROL-3-PHOSPHATE DEHYDROGENASE 41 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03149 Pste-Chr4 23056008 23068909 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03149 1 452 Acyl Lipid Metabolism Gene Families AT2G41540 83.871 0.0 770
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g03149 4 23056008 23068909 Pste4g03149 4 23056008 23068909 ECH
Pste5g00142 5 1066183 1070186 Pste4g03149 4 23056008 23068909 PCT