Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02827 ATGCACATATTTGTTAGCTTTCATGGTTATGTTGGTATTATGAAATATAAATTTGATCCCATGTATCGTGTACAGAGTGATAAAAAAGTTGCCGTCTGTAGCATACATCCATCAGAGCAAGCCACACTGCAATGCCTAGGCTGTGTTAAGGCCAAAATACCACTTTCGAAGAGTTACCATTGCACCACAAAGTGTTTTTCGGATGCATGGCAGCATCATCGTGTCTTACATGACCGTGCCGCAAGTGCTCTTAATGAAAATGGAAATGAGGAGGAGGAGGTATTTGGGCGCTTTAATAGTACTGGGTCTGGGACAATCAATTCTGGCTTATCTGCCTCTGCATCAAGTGCTAGCTTGACTAATGGGTCTGCAACACCTTTGTATCCAGCAGCTGTCACACAAAGAAGTGGTGAAACTTGGTTTGAAGTGGGACGATCTAAGACTTACACCCCTACTGCTGATGATGTTGGTCATGTTCTCAAGTTTGAGTGTGTTGTAGTTGATGCAGAGACAAAACTGCCAGTGGGGCATGTTAATACTATACTAACTTCGCGTGTCATTCCTGCTCCCTCGCCTATTCCACGTCGAGCGATACATGTTGATGGGATGGGGCAATTAGATGGGGATGGGAGAATGACATCTTCAGCAACTTTTACTGTCCTATCATACAATATATTGTCTGAAGTATATGCCTCAAATGATCTATACAATTACTGCCCTTCTTGGGCTCTCTCTTGGCCATATCGCAGGCAAAATTTGTTACGAGAAATTGTTGGTTACCGTGCAGACATTATTTGTCTTCAGGAGCTATTAGCTTCTGAATTAGCTAACAGACAACCTCTTTCCCTCCAGGTTCAAAGCGATCATTATGAAGAATTTTTTGCTCCTGAACTGGACAAACATGGATACTATGGTCTTTACAAGAGAAAGACGAATGAGGTATACAGTGGCAACACAAATACAATTGACGGTTGTGCAACATTTTTCCGTAGAGACAGATTTTCACATGTTAAGAAATATGAGGTGGAATTTAACAAGGCCGCACAGTCTTTGACAGAGGCTACAATTCCAACCACTCAGAAGAAAACTGCCTTGAATCGATTGGTTAAGGATAATGTTGCACTAATAGTGGTTCTAGAAGCAAAAGTTAACAATCAGCCATTTGATAATCCTGGGAAAAGACAACTTCTTTGTGTGGCAAATACACATGTAAATGTCCCCCAAGATTTAAAGGATGTGAAACTTTGGCAGGTTCATACACTCTTAAAAGGATTGGAGAAAATAGCTGCAAGCGCAGACATTCCAATGTTGGTTTGTGGAGATTTTAATTCAGTTCCAGGAAGTGCTCCCCATGCACTTCTTGCGATGGGGAAGGTAGATCCTTCACATCCTGATTTAGCAGTTGACCCGCTTAACATTTTACGTCCTCACAGCAAGTTGGTTCATCAGTTGCCACTGGTCAGTGCATACTCATCTTTTGCAAGAACAGTTGGCCTTGGATATGAGCCGCATAAAAGGAGGCTGGATGGTGGAACAAATGAGCCTTTATTCACAAATGTCACTAGAGATTTTATTGGCACTCTAGATTACATATTTTACACAGCGGATTCATTGGTTGTGGAGTCATTATTGGAGTTACTGGATGAGGAGAGTTTGAGGAAGGACACTGCACTTCCTTCACCTGAATGGTCCTCAGATCACATAGCTCTCTTAGCTGAGTTTCGCTGCTGCAAGAATAAGTCTAGGCGTTGACAGTTAAGGTCAGTTTCAGAGATACATAAAGAAAAAGGGCGGAAGAAGCATTTGGTTGGTAAGTTTTTGTAAAAAATGGTAGATCGTGCCTGTCTTTTTCAGGCATCTGCAAGTGGGTTGCGATGATCTGCTATGTATCATCATGTCACCTTTATCTCATAGAAAAAAATTATGATTTACTGCCTTCTTGACTTGCTTCTGTCTACGCCCCTACCCCCAAAGCTCCTAATTTTCTTTCCTTTTTAAAGGGAATTTTCTCATAGAGTCCTATTGGGGTTTCCATACATCTTAGTAAAGAACTAAAGTCCTTCCAATCTAGTTACCGTGGCGGAGCCTAGGGCTCAAATTTCTTGCATATCTGTATTGATAATCTTCGAAACATAGAGAATTGTTTTTATTTTGCTCTGCCTGTCAGAAACCTGACAAATTTGGTATGGCCTAATTGATAATGAAGTAGAAGAATTGAACCCAAATACGAAAGTGAGTTGCTTAACACTGGGGTGAGGTTTGAACTGCTGCTAATTGCTACAATTGTAGCAACATAAGAGAGATGGTTACTATCAGTGACTGTAGAAAAGGCCATGACTAATCTAATACTTGATTTTGCCATTATCCTTTTTACATATATTGGCAGCAAATGAACATTCCGTCTGTGTGATACAGGAAAATTATTGGCGTTTTTTCTTATTACAATACGACAAAAGGCATCTTTTTTC 2468 0.4068 MHIFVSFHGYVGIMKYKFDPMYRVQSDKKVAVCSIHPSEQATLQCLGCVKAKIPLSKSYHCTTKCFSDAWQHHRVLHDRAASALNENGNEEEEVFGRFNSTGSGTINSGLSASASSASLTNGSATPLYPAAVTQRSGETWFEVGRSKTYTPTADDVGHVLKFECVVVDAETKLPVGHVNTILTSRVIPAPSPIPRRAIHVDGMGQLDGDGRMTSSATFTVLSYNILSEVYASNDLYNYCPSWALSWPYRRQNLLREIVGYRADIICLQELLASELANRQPLSLQVQSDHYEEFFAPELDKHGYYGLYKRKTNEVYSGNTNTIDGCATFFRRDRFSHVKKYEVEFNKAAQSLTEATIPTTQKKTALNRLVKDNVALIVVLEAKVNNQPFDNPGKRQLLCVANTHVNVPQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKVDPSHPDLAVDPLNILRPHSKLVHQLPLVSAYSSFARTVGLGYEPHKRRLDGGTNEPLFTNVTRDFIGTLDYIFYTADSLVVESLLELLDEESLRKDTALPSPEWSSDHIALLAEFRCCKNKSRR 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02827 583 CDD Deadenylase_CCR4 220 576 - -
Pste4g02827 583 SUPERFAMILY DNase I-like 214 577 IPR036691 -
Pste4g02827 583 FunFam Carbon catabolite repressor protein 4 1 187 581 - -
Pste4g02827 583 Gene3D Endonuclease/exonuclease/phosphatase 188 582 IPR036691 -
Pste4g02827 583 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 130 576 - -
Pste4g02827 583 Pfam Endonuclease/Exonuclease/phosphatase family 221 567 IPR005135 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02827 Pste-Chr4 19896827 19901399 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02827 4 19896827 19901399 Pste4g02827 4 19896827 19901399 ECH
Pste5g02561 5 18046880 18051126 Pste4g02827 4 19896827 19901399 PCT