Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g02781 CAACTACTAAATATAATTCATGATAGGCTTATAGGCCTTCAGTTTCTCTCTTCTCAGCAACCATTAAAGCATCTTTTTAGCATCAGATGTACACACAGGAATGGTGAATGACTTGGCAACAAGTTCTGATTTTGAGAAATTCTCATGGAAAATTGAGGATTTCTCAAAACAAAACGTCATCAAATTGCGCTCCAAGCCTTTCAAAATCCGAGGTTGTACATGGAGGATCATAGTGTATCCATTGAGAAGTGATGTGAATCATTTTTCAGTTTATTTGATGGTTGCTGATTCTTTACGACCGTACGGATGGAGCAGAAACACGTTTTTCAAGTTGTCTCTAGTAAATCAGAAGGATAAGAAGAAATCAATATCCAAAGAGACACAGCAAAAGTTCAATGGAGGGCATCGTAGCTGGGGTTCATTTTTCTTGAATCTTAGTGATTTCTACAACTCAGAAACTGGATATCTAGTGAAGAACACATGCATAATTGAAGCACACATTTTTGTGTCTGATTTATTAGCACCTAAGATTAAAGTCCACCCAAATTGTTCTCCAACTTATGATTCTCTAATAGGTGATCAAGCAACAGAATCATCCTCTGATGATAGAACCACCATAAGTCCTAGAACCTCAGGATCTAGTGGAGCAGCAGAAGGGGAAGCTCAAGGTTCAAATAATTTGACTCTAAAGGAGCTCATGGATTTTGGCAGTTTAAGACCAGAAGAAGCAGTTTTCATTCCTCTATTGGAAGAGGTTTGCATATGGCGTCCAAATCTGATACAGTGCCAAAGGGAAAGGACTCCAAGGTTCAGACAATGGGCCTTCACATCTTTAGGCCAAGTTTTGCACTTTCTAAAGACCAAAAAAGTGAAAGAAATGAGTGAAGAGGACATAAAGTGCCTTGAAGGATTGTGGAAGGAACTTGTCAAATCCTCAGGTTTTGACCTGGCTTGGCTGGAGTCATATGTTCAATCAGCACTGAATGTGAAGGAGCATATGGAAAAGGCAAACAAATTGAAGAAACTGAGGGATAAGGTAGTTAGTTTGGAGATTAAGATGAAGAGGTTGAGGGGGGAATTGGCTTCTGCTGAAACGGAGTTTCAGGTGGCAAGAAAAGACTTGATTGAAGTAAGAAAAGAGTTCCTTGAAATGGATGTAACAATTGGTTATGCTATTTTTGATATGAAGGGCATGCACAAAATTTTCTTTTCTAGATATGTACAAAATTATGTTGACACAGTAGCAGCTTGGTTATAA 1258 0.3855 MVNDLATSSDFEKFSWKIEDFSKQNVIKLRSKPFKIRGCTWRIIVYPLRSDVNHFSVYLMVADSLRPYGWSRNTFFKLSLVNQKDKKKSISKETQQKFNGGHRSWGSFFLNLSDFYNSETGYLVKNTCIIEAHIFVSDLLAPKIKVHPNCSPTYDSLIGDQATESSSDDRTTISPRTSGSSGAAEGEAQGSNNLTLKELMDFGSLRPEEAVFIPLLEEVCIWRPNLIQCQRERTPRFRQWAFTSLGQVLHFLKTKKVKEMSEEDIKCLEGLWKELVKSSGFDLAWLESYVQSALNVKEHMEKANKLKKLRDKVVSLEIKMKRLRGELASAETEFQVARKDLIEVRKEFLEMDVTIGYAIFDMKGMHKIFFSRYVQNYVDTVAAWL 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g02781 385 CDD MATH 13 134 IPR002083 GO:0005515
Pste4g02781 385 SUPERFAMILY TRAF domain-like 13 137 - -
Pste4g02781 385 SMART math_3 13 115 IPR002083 GO:0005515
Pste4g02781 385 Pfam MATH domain 19 136 IPR002083 GO:0005515
Pste4g02781 385 Coils Coil 299 347 - -
Pste4g02781 385 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 9 146 IPR008974 GO:0005515
Pste4g02781 385 ProSiteProfiles MATH/TRAF domain profile. 11 134 IPR002083 GO:0005515
Pste4g02781 385 Coils Coil 385 385 - -
Pste4g02781 385 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 12 337 - -
Pste4g02781 385 MobiDBLite consensus disorder prediction 157 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g02781 Pste-Chr4 19619936 19621880 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g02781 4 19619936 19621880 Pste4g02781 4 19619936 19621880 ECH
Pste4g02781 4 19619936 19621880 Pste8g00894 8 4590046 4604240 ECH